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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000460.1-P Field mustard cytosol 98.6 98.6
CDY53015 Canola cytosol 78.14 84.0
CDX80129 Canola cytosol 82.79 82.41
CDY71513 Canola plastid 98.14 79.92
AT2G47730.2 Thale cress plastid 83.72 68.44
VIT_07s0005g00030.t01 Wine grape cytosol 63.26 63.55
VIT_07s0005g00010.t01 Wine grape cytosol 61.4 61.68
Solyc06g009020.2.1 Tomato plastid 58.14 58.69
KRH71552 Soybean cytosol 59.07 58.26
PGSC0003DMT400037918 Potato cytosol 57.21 57.75
CDX89931 Canola cytosol, mitochondrion 56.28 57.62
CDY18131 Canola cytosol, mitochondrion 55.81 57.14
CDY15444 Canola cytosol, mitochondrion 55.35 56.67
PGSC0003DMT400029561 Potato cytosol 55.35 55.61
CDX97273 Canola cytosol, mitochondrion 54.88 55.4
CDY65569 Canola cytosol, mitochondrion 54.88 55.4
Solyc06g009040.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 54.42 55.19
CDY50374 Canola cytosol, mitochondrion 53.49 53.99
CDX90934 Canola cytosol, mitochondrion 52.56 53.05
CDY18015 Canola cytosol 52.56 53.05
Solyc09g074850.2.1 Tomato cytosol 49.3 53.0
CDX90933 Canola cytosol 52.09 52.58
CDY18016 Canola cytosol, mitochondrion 52.09 52.58
CDY22058 Canola cytosol, mitochondrion 52.09 52.58
CDY50375 Canola cytosol, mitochondrion 51.63 52.11
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 46.98 46.12
CDY37454 Canola cytosol, mitochondrion 53.02 45.42
CDY32486 Canola cytosol, mitochondrion 52.56 45.02
CDX93963 Canola cytosol 45.58 44.75
CDY07846 Canola cytosol 44.65 44.04
CDX89927 Canola cytosol 51.16 43.48
CDX85469 Canola cytosol, mitochondrion 40.0 40.0
CDY02726 Canola cytosol 38.6 38.78
CDY16947 Canola cytosol 38.14 38.5
CDX69395 Canola cytosol 38.14 38.5
CDY37204 Canola cytosol 45.12 38.19
CDY29636 Canola cytosol 38.14 38.14
CDX97788 Canola cytosol 38.14 38.14
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 37.21 38.1
CDX84816 Canola cytosol 37.67 37.67
CDY23980 Canola cytosol 37.67 37.67
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 36.28 37.14
CDX84815 Canola cytosol, endoplasmic reticulum 36.28 36.28
CDY23979 Canola endoplasmic reticulum 35.81 35.81
CDY18136 Canola cytosol 51.16 33.03
CDY07850 Canola cytosol, plastid 50.23 32.43
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 39.07 24.56
CDX89928 Canola endoplasmic reticulum 2.79 2.48
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10EnsemblPlants:CDX95731ProteinID:CDX95731ProteinID:CDX95731.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00101634001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF7SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EEDDB4:::::
Description
BnaC03g26120D
Coordinates
chrLK031890:+:994191..995397
Molecular Weight (calculated)
24154.5 Da
IEP (calculated)
6.358
GRAVY (calculated)
-0.058
Length
215 amino acids
Sequence
(BLAST)
001: MASIKVHGVP MSTATMRVLA ALYEKELEFE LIPVDMRAGA HKQEPFLSLN PFGQIPALQD GDLTLFESRA ITEYIADEYS EKGEKLMCPG CNKVKALTKV
101: WLNVEGQQFD PIASKIAFER VFKGMFGMTT DPAAVQDLEG KLVRVLDIYE ARLSKSEFLA CDCFTLADLH HLPVIHYLMG TDSKALFESR PKVCEWVKKI
201: TARPAWAKVV DLQKQ
Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
Arabidopsis Description
GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.