CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033361.1-P	Field mustard	cytosol	55.56	98.93
CDX89927	Canola	cytosol	74.77	98.42
CDY37454	Canola	cytosol, mitochondrion	60.06	79.68
CDY32486	Canola	cytosol, mitochondrion	59.46	78.88
CDY07846	Canola	cytosol	51.35	78.44
AT1G02950.5	Thale cress	cytosol	59.46	77.65
CDY15444	Canola	cytosol, mitochondrion	36.94	58.57
CDY18131	Canola	cytosol, mitochondrion	36.64	58.1
CDX89931	Canola	cytosol, mitochondrion	36.64	58.1
CDX90934	Canola	cytosol, mitochondrion	36.94	57.75
CDY50374	Canola	cytosol, mitochondrion	36.64	57.28
CDY18016	Canola	cytosol, mitochondrion	36.34	56.81
CDY22058	Canola	cytosol, mitochondrion	36.04	56.34
CDY07850	Canola	cytosol, plastid	56.16	56.16
CDX97273	Canola	cytosol, mitochondrion	35.74	55.87
CDY65569	Canola	cytosol, mitochondrion	35.74	55.87
CDY50375	Canola	cytosol, mitochondrion	34.83	54.46
VIT_07s0005g00010.t01	Wine grape	cytosol	34.83	54.21
CDX90933	Canola	cytosol	34.53	53.99
CDY18015	Canola	cytosol	34.23	53.52
Solyc09g074850.2.1	Tomato	cytosol	31.83	53.0
VIT_07s0005g00030.t01	Wine grape	cytosol	33.63	52.34
PGSC0003DMT400029561	Potato	cytosol	33.63	52.34
CDY53015	Canola	cytosol	30.93	51.5
CDX95731	Canola	cytosol	33.03	51.16
CDX80129	Canola	cytosol	33.03	50.93
PGSC0003DMT400037918	Potato	cytosol	31.83	49.77
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	31.53	49.53
Solyc06g009020.2.1	Tomato	plastid	31.53	49.3
CDY71513	Canola	plastid	33.93	42.8
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.33	41.55
CDX85469	Canola	cytosol, mitochondrion	26.73	41.4
CDX93963	Canola	cytosol	26.73	40.64
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	25.53	40.48
CDX69395	Canola	cytosol	25.83	40.38
CDY02726	Canola	cytosol	25.83	40.19
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	25.23	40.0
CDY16947	Canola	cytosol	25.53	39.91
CDY37204	Canola	cytosol	29.73	38.98
CDY29636	Canola	cytosol	23.12	35.81
CDX97788	Canola	cytosol	23.12	35.81
CDY23980	Canola	cytosol	22.82	35.35
CDX84816	Canola	cytosol	22.82	35.35
CDX84815	Canola	cytosol, endoplasmic reticulum	22.22	34.42
CDY23979	Canola	endoplasmic reticulum	21.92	33.95
CDX89928	Canola	endoplasmic reticulum	21.02	28.93
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.73	26.02
CDY18134	Canola	nucleus	0.9	6.98

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A078FYR6	EnsemblPlants:CDY18136	ProteinID:CDY18136	ProteinID:CDY18136.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00002658001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF2B1B	:	:	:

Description

BnaC05g01590DBnaC05g01590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYR6]

Coordinates

chrLK032083:-:23251..25671

Molecular Weight (calculated)

38039.0 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.220

Length

333 amino acids

Sequence
(BLAST)

001: MSNTSHPFMD CLKMVFNLFP NWKRATEVKK LGYKLHGNPF STNTRRVLAV LLEKGLSYEP ITVDLKTGEH KKDSFLGLNP FGQVPVLEDG NLTLCESRAI
101: TQYIAYVHSS RGTQLLNLQS HETMAILTMW MEIEAHQFDP LASKLTWELV IKPLYGLETD HMVVKENEAG LEKVLDVYEK RLGDSRFLAC NTFTLVDLHH
201: LPNIQFLLGT PTKRLFENRP KVRNWVHEIT SREAWKMACD PEKSWFGAGY KIYGYPSSPN TRRALAVLHE KGLSFDRITV NLTTGDQQKP SFLPINASFT
301: DRSLDYLCSK ICLGLNSWSS IPFLLIHISV WST

Best Arabidopsis Sequence Match ( AT1G02950.5 )
(BLAST)

001: MQKLNKCIYI VYMDCLQMVF KLFPNWKREA EVKKLGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN

Arabidopsis Description

ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.