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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018543.1-P Field mustard cytosol, mitochondrion 99.53 99.53
CDY65569 Canola cytosol, mitochondrion 99.53 99.53
AT2G02930.1 Thale cress cytosol, mitochondrion 87.79 88.21
CDY50374 Canola cytosol, mitochondrion 87.79 87.79
CDY22058 Canola cytosol, mitochondrion 87.32 87.32
CDY50375 Canola cytosol, mitochondrion 86.39 86.39
AT4G02520.1 Thale cress cytosol, mitochondrion 85.92 86.32
CDY18016 Canola cytosol, mitochondrion 85.92 85.92
CDX90934 Canola cytosol, mitochondrion 85.45 85.45
CDX90933 Canola cytosol 84.51 84.51
CDY18015 Canola cytosol 83.57 83.57
CDY15444 Canola cytosol, mitochondrion 78.4 79.52
CDY18131 Canola cytosol, mitochondrion 77.46 78.57
CDX89931 Canola cytosol, mitochondrion 76.53 77.62
PGSC0003DMT400037918 Potato cytosol 61.97 61.97
Solyc06g009020.2.1 Tomato plastid 61.5 61.5
Solyc06g009040.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 59.62 59.91
VIT_07s0005g00010.t01 Wine grape cytosol 59.62 59.35
PGSC0003DMT400029561 Potato cytosol 58.69 58.41
VIT_07s0005g00030.t01 Wine grape cytosol 58.22 57.94
CDX80129 Canola cytosol 58.22 57.41
CDY53015 Canola cytosol 53.05 56.5
Solyc09g074850.2.1 Tomato cytosol 52.11 55.5
CDX95731 Canola cytosol 55.4 54.88
CDY07846 Canola cytosol 52.58 51.38
CDY37454 Canola cytosol, mitochondrion 56.81 48.21
CDY32486 Canola cytosol, mitochondrion 56.34 47.81
CDX89927 Canola cytosol 56.34 47.43
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 46.48 45.21
CDX93963 Canola cytosol 46.01 44.75
CDY71513 Canola plastid 55.4 44.7
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 43.19 43.81
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 42.25 42.86
CDX85469 Canola cytosol, mitochondrion 42.72 42.33
CDY02726 Canola cytosol 41.31 41.12
CDY16947 Canola cytosol 40.85 40.85
CDX69395 Canola cytosol 40.38 40.38
CDX97788 Canola cytosol 39.91 39.53
CDY29636 Canola cytosol 39.44 39.07
CDY37204 Canola cytosol 46.48 38.98
CDX84816 Canola cytosol 38.97 38.6
CDY23980 Canola cytosol 38.97 38.6
CDY07850 Canola cytosol, plastid 57.28 36.64
CDX84815 Canola cytosol, endoplasmic reticulum 36.15 35.81
CDY18136 Canola cytosol 55.87 35.74
CDY23979 Canola endoplasmic reticulum 35.68 35.35
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 41.78 26.02
CDX89928 Canola endoplasmic reticulum 2.35 2.07
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10EnsemblPlants:CDX97273ProteinID:CDX97273ProteinID:CDX97273.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00104311001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF7SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EF0136:::::
Description
BnaA02g20640D
Coordinates
chrLK031898:-:483339..484488
Molecular Weight (calculated)
24269.1 Da
IEP (calculated)
5.781
GRAVY (calculated)
-0.251
Length
213 amino acids
Sequence
(BLAST)
001: MAGIKVFGHA ASTATRRVLL TLHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGKVPAFED GDLKLFESRA ITQYIAHRYE EEGTNLLPAD SKNISHYAIM
101: AIGMEVEAHH FDPVASKLAW EQVFKLFYGM TTDQAVVEEE EAKLATVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFD ERPLVSEWVA
201: EITNRPASQK ILQ
Best Arabidopsis Sequence Match ( AT2G02930.1 )
(BLAST)
001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL
Arabidopsis Description
GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.