Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37454 | Canola | cytosol, mitochondrion | 78.66 | 79.28 |
| CDY07846 | Canola | cytosol | 67.98 | 78.9 |
| CDY32486 | Canola | cytosol, mitochondrion | 77.87 | 78.49 |
| AT1G02950.5 | Thale cress | cytosol | 78.66 | 78.04 |
| CDY18136 | Canola | cytosol | 98.42 | 74.77 |
| CDY15444 | Canola | cytosol, mitochondrion | 49.01 | 59.05 |
| CDX89931 | Canola | cytosol, mitochondrion | 48.62 | 58.57 |
| CDY18131 | Canola | cytosol, mitochondrion | 48.62 | 58.57 |
| CDX90934 | Canola | cytosol, mitochondrion | 49.01 | 58.22 |
| CDY50374 | Canola | cytosol, mitochondrion | 48.62 | 57.75 |
| CDY18016 | Canola | cytosol, mitochondrion | 48.22 | 57.28 |
| CDY22058 | Canola | cytosol, mitochondrion | 47.83 | 56.81 |
| CDY07850 | Canola | cytosol, plastid | 74.31 | 56.46 |
| CDY65569 | Canola | cytosol, mitochondrion | 47.43 | 56.34 |
| CDX97273 | Canola | cytosol, mitochondrion | 47.43 | 56.34 |
| CDY50375 | Canola | cytosol, mitochondrion | 46.25 | 54.93 |
| CDX90933 | Canola | cytosol | 45.85 | 54.46 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 45.85 | 54.21 |
| CDY18015 | Canola | cytosol | 45.45 | 53.99 |
| Solyc09g074850.2.1 | Tomato | cytosol | 42.29 | 53.5 |
| PGSC0003DMT400029561 | Potato | cytosol | 44.66 | 52.8 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 44.27 | 52.34 |
| CDY53015 | Canola | cytosol | 40.71 | 51.5 |
| CDX95731 | Canola | cytosol | 43.48 | 51.16 |
| CDX80129 | Canola | cytosol | 43.48 | 50.93 |
| PGSC0003DMT400037918 | Potato | cytosol | 42.69 | 50.7 |
| Solyc06g009020.2.1 | Tomato | plastid | 41.9 | 49.77 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.11 | 49.06 |
| CDY71513 | Canola | plastid | 44.66 | 42.8 |
| CDX85469 | Canola | cytosol, mitochondrion | 35.57 | 41.86 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.97 | 41.55 |
| CDX93963 | Canola | cytosol | 35.57 | 41.1 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.99 | 40.95 |
| CDX69395 | Canola | cytosol | 34.39 | 40.85 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.6 | 40.48 |
| CDY16947 | Canola | cytosol | 33.99 | 40.38 |
| CDY02726 | Canola | cytosol | 33.99 | 40.19 |
| CDY37204 | Canola | cytosol | 39.53 | 39.37 |
| CDY29636 | Canola | cytosol | 30.83 | 36.28 |
| CDX97788 | Canola | cytosol | 30.83 | 36.28 |
| CDY23980 | Canola | cytosol | 30.43 | 35.81 |
| CDX84816 | Canola | cytosol | 30.43 | 35.81 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 29.64 | 34.88 |
| CDY23979 | Canola | endoplasmic reticulum | 29.25 | 34.42 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 35.18 | 26.02 |
| CDX89928 | Canola | endoplasmic reticulum | 5.53 | 5.79 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EnsemblPlants:CDX89927 | ProteinID:CDX89927 | ProteinID:CDX89927.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00150411001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EE5E25 | : | : | : | : | : |
Description
BnaA10g01550D
Coordinates
chrLK031861:+:811596..812885
Molecular Weight (calculated)
29117.3 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.292
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNTSHPFMD CLKMVFNLFP NWKRATEVKK LVAGYKLHGN PFSTNTRRVL AVLLEKGLSY EPITVDLKTG EHKKDSFLGL NPFGQVPVLE DGNLTLCESR
101: AITQYIAYVH SSRGTQLLNL QSHETMAILT MWMEIEAHQF DPLASKLTWE LVIKPLYGLE TDHMVVKENE AGLEKVLDVY EKRLGESRFL ACNTFTLVDL
201: HHLPNIQFLL GTPTKRLFEN RPKVRNWVHE ITSREAWKMA CDPEKSWFVN QGK
101: AITQYIAYVH SSRGTQLLNL QSHETMAILT MWMEIEAHQF DPLASKLTWE LVIKPLYGLE TDHMVVKENE AGLEKVLDVY EKRLGESRFL ACNTFTLVDL
201: HHLPNIQFLL GTPTKRLFEN RPKVRNWVHE ITSREAWKMA CDPEKSWFVN QGK
001: MDCLQMVFKL FPNWKREAEV KKLVAGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE SRAITQYIAY
101: VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV DLHHLPNIQY
201: LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
101: VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV DLHHLPNIQY
201: LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
Arabidopsis Description
ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.