Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004434.1-P | Field mustard | cytosol | 94.5 | 94.5 |
| CDX80129 | Canola | cytosol | 95.5 | 88.43 |
| CDX95731 | Canola | cytosol | 84.0 | 78.14 |
| CDY71513 | Canola | plastid | 83.0 | 62.88 |
| AT2G47730.2 | Thale cress | plastid | 81.0 | 61.6 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 62.0 | 57.94 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 62.0 | 57.94 |
| PGSC0003DMT400037918 | Potato | cytosol | 61.0 | 57.28 |
| Solyc06g009020.2.1 | Tomato | plastid | 60.5 | 56.81 |
| Solyc09g074850.2.1 | Tomato | cytosol | 56.0 | 56.0 |
| KRH71552 | Soybean | cytosol | 60.5 | 55.5 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 56.5 | 53.3 |
| CDY65569 | Canola | cytosol, mitochondrion | 56.5 | 53.05 |
| CDX97273 | Canola | cytosol, mitochondrion | 56.5 | 53.05 |
| PGSC0003DMT400029561 | Potato | cytosol | 56.0 | 52.34 |
| CDY18016 | Canola | cytosol, mitochondrion | 55.5 | 52.11 |
| CDX90934 | Canola | cytosol, mitochondrion | 55.5 | 52.11 |
| CDX90933 | Canola | cytosol | 55.5 | 52.11 |
| CDY18131 | Canola | cytosol, mitochondrion | 54.5 | 51.9 |
| CDX89931 | Canola | cytosol, mitochondrion | 54.5 | 51.9 |
| CDY15444 | Canola | cytosol, mitochondrion | 54.5 | 51.9 |
| CDY18015 | Canola | cytosol | 55.0 | 51.64 |
| CDY50375 | Canola | cytosol, mitochondrion | 54.5 | 51.17 |
| CDY50374 | Canola | cytosol, mitochondrion | 54.5 | 51.17 |
| CDY22058 | Canola | cytosol, mitochondrion | 54.0 | 50.7 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 48.0 | 43.84 |
| CDX93963 | Canola | cytosol | 47.0 | 42.92 |
| CDY37454 | Canola | cytosol, mitochondrion | 53.0 | 42.23 |
| CDY32486 | Canola | cytosol, mitochondrion | 52.5 | 41.83 |
| CDY07846 | Canola | cytosol | 45.0 | 41.28 |
| CDX89927 | Canola | cytosol | 51.5 | 40.71 |
| CDY02726 | Canola | cytosol | 43.0 | 40.19 |
| CDX85469 | Canola | cytosol, mitochondrion | 43.0 | 40.0 |
| CDY16947 | Canola | cytosol | 42.5 | 39.91 |
| CDY29636 | Canola | cytosol | 42.0 | 39.07 |
| CDX97788 | Canola | cytosol | 42.0 | 39.07 |
| CDX84816 | Canola | cytosol | 41.5 | 38.6 |
| CDY23980 | Canola | cytosol | 41.5 | 38.6 |
| CDX69395 | Canola | cytosol | 41.0 | 38.5 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 40.0 | 38.1 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 40.5 | 37.67 |
| CDY23979 | Canola | endoplasmic reticulum | 40.0 | 37.21 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 39.0 | 37.14 |
| CDY37204 | Canola | cytosol | 47.0 | 37.01 |
| CDY18136 | Canola | cytosol | 51.5 | 30.93 |
| CDY07850 | Canola | cytosol, plastid | 51.0 | 30.63 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 43.0 | 25.15 |
| CDX89928 | Canola | endoplasmic reticulum | 2.0 | 1.65 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A078IPP8 | EnsemblPlants:CDY53015 | ProteinID:CDY53015 | ProteinID:CDY53015.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00008332001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE9E2C | : | : | : | : |
Description
BnaC04g00150DBnaC04g00150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPP8]
Coordinates
chrLK033154:+:30584..31630
Molecular Weight (calculated)
22613.8 Da
IEP (calculated)
8.057
GRAVY (calculated)
-0.103
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVLATLYEK GLDFEIVPVD MKAGAHKQEP LISLNPFGQI PALLDGDLTL FESRAITEYI AEEYSDKGEK LLCQGCKKLK ATTKVWLQVE GQQFDPIASK
101: LAFERVFKGM LGMTTDPAAV EDLEAKLVKV LDIYEARLSK SPFLAGDCFT LADLHHLPII YYLMGTDSKK LFESRPKVKE WIKKITARPA WVKVLHLQKQ
101: LAFERVFKGM LGMTTDPAAV EDLEAKLVKV LDIYEARLSK SPFLAGDCFT LADLHHLPII YYLMGTDSKK LFESRPKVKE WIKKITARPA WVKVLHLQKQ
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
Arabidopsis Description
GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.