Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22058 | Canola | cytosol, mitochondrion | 95.31 | 95.31 |
| CDY65569 | Canola | cytosol, mitochondrion | 87.79 | 87.79 |
| CDX97273 | Canola | cytosol, mitochondrion | 87.79 | 87.79 |
| AT2G02930.1 | Thale cress | cytosol, mitochondrion | 87.32 | 87.74 |
| CDY50375 | Canola | cytosol, mitochondrion | 85.92 | 85.92 |
| CDY18016 | Canola | cytosol, mitochondrion | 85.92 | 85.92 |
| CDY18015 | Canola | cytosol | 85.45 | 85.45 |
| CDX90934 | Canola | cytosol, mitochondrion | 85.45 | 85.45 |
| CDX90933 | Canola | cytosol | 85.45 | 85.45 |
| AT4G02520.1 | Thale cress | cytosol, mitochondrion | 84.04 | 84.43 |
| CDY18131 | Canola | cytosol, mitochondrion | 76.53 | 77.62 |
| CDY15444 | Canola | cytosol, mitochondrion | 76.06 | 77.14 |
| CDX89931 | Canola | cytosol, mitochondrion | 75.59 | 76.67 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 61.03 | 60.75 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 59.15 | 59.43 |
| Solyc06g009020.2.1 | Tomato | plastid | 59.15 | 59.15 |
| PGSC0003DMT400037918 | Potato | cytosol | 59.15 | 59.15 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 58.69 | 58.41 |
| PGSC0003DMT400029561 | Potato | cytosol | 58.22 | 57.94 |
| Solyc09g074850.2.1 | Tomato | cytosol | 53.05 | 56.5 |
| CDX80129 | Canola | cytosol | 55.4 | 54.63 |
| CDY53015 | Canola | cytosol | 51.17 | 54.5 |
| CDX95731 | Canola | cytosol | 53.99 | 53.49 |
| CDY07846 | Canola | cytosol | 53.05 | 51.83 |
| CDY37454 | Canola | cytosol, mitochondrion | 58.22 | 49.4 |
| CDY32486 | Canola | cytosol, mitochondrion | 57.75 | 49.0 |
| CDX89927 | Canola | cytosol | 57.75 | 48.62 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 46.95 | 45.66 |
| CDX93963 | Canola | cytosol | 46.01 | 44.75 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 43.19 | 43.81 |
| CDY71513 | Canola | plastid | 53.99 | 43.56 |
| CDX85469 | Canola | cytosol, mitochondrion | 43.66 | 43.26 |
| CDY16947 | Canola | cytosol | 43.19 | 43.19 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 42.25 | 42.86 |
| CDX69395 | Canola | cytosol | 42.72 | 42.72 |
| CDY02726 | Canola | cytosol | 41.78 | 41.59 |
| CDY37204 | Canola | cytosol | 46.95 | 39.37 |
| CDX97788 | Canola | cytosol | 39.44 | 39.07 |
| CDY29636 | Canola | cytosol | 38.97 | 38.6 |
| CDY23980 | Canola | cytosol | 38.5 | 38.14 |
| CDX84816 | Canola | cytosol | 38.5 | 38.14 |
| CDY18136 | Canola | cytosol | 57.28 | 36.64 |
| CDY07850 | Canola | cytosol, plastid | 57.28 | 36.64 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 36.15 | 35.81 |
| CDY23979 | Canola | endoplasmic reticulum | 35.68 | 35.35 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 42.25 | 26.32 |
| CDX89928 | Canola | endoplasmic reticulum | 1.88 | 1.65 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A078ILW4 | EnsemblPlants:CDY50374 | ProteinID:CDY50374 | ProteinID:CDY50374.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00096592001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0001B63C13 | SEG:seg | : | : | : |
Description
BnaCnng19060DBnaCnng19060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILW4]
Coordinates
chrLK032905:+:950..2226
Molecular Weight (calculated)
24103.0 Da
IEP (calculated)
6.978
GRAVY (calculated)
-0.275
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIKVFGNA ASTSTRRVLL ALHEKNLDFE LVNIDLKDGE HKKEPFLSRN PFGKVPAFED GDLKLFESRA ITQYIAHRYE SQGTNLLPAD FKNPAHYAIM
101: AIGMEVEAHQ FDPVASKLVW EQVIKNFVGL TTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGDTFTLTD LHHIPVIQYL LGTPTKKLFA ERPRVNEWVA
201: EVTKRPASQK IHQ
101: AIGMEVEAHQ FDPVASKLVW EQVIKNFVGL TTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGDTFTLTD LHHIPVIQYL LGTPTKKLFA ERPRVNEWVA
201: EVTKRPASQK IHQ
001: MAGIKVFGHP ASTSTRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLPAD SKNIAQYAIM
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL
101: SIGIQVEAHQ FDPVASKLAW EQVFKFNYGL NTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPVIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VL
Arabidopsis Description
GSTF3Glutathione S-transferase F3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLM6]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.