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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400029561
PGSC0003DMT400037918

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G02930.1 PGSC0003DMT400029561 AT1G02920.1 21798944
AT1G02930.1 PGSC0003DMT400037918 AT1G02920.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g009020.2.1 Tomato plastid 96.24 96.24
Solyc06g009040.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 83.1 83.49
PGSC0003DMT400029561 Potato cytosol 70.42 70.09
VIT_07s0005g00010.t01 Wine grape cytosol 66.67 66.36
VIT_07s0005g00030.t01 Wine grape cytosol 65.26 64.95
CDY65569 Canola cytosol, mitochondrion 62.44 62.44
Bra018543.1-P Field mustard cytosol, mitochondrion 62.44 62.44
CDX97273 Canola cytosol, mitochondrion 61.97 61.97
Bra004434.1-P Field mustard cytosol 57.75 61.5
CDY15444 Canola cytosol, mitochondrion 60.56 61.43
Bra030515.1-P Field mustard cytosol, mitochondrion 60.56 61.43
CDY53015 Canola cytosol 57.28 61.0
AT2G02930.1 Thale cress cytosol, mitochondrion 60.56 60.85
Bra036259.1-P Field mustard cytosol, mitochondrion 60.56 60.56
Bra036260.1-P Field mustard cytosol, mitochondrion 60.56 60.56
CDY18131 Canola cytosol, mitochondrion 59.62 60.48
CDX80129 Canola cytosol 61.03 60.19
CDY22058 Canola cytosol, mitochondrion 60.09 60.09
KRH71552 Soybean cytosol 61.5 60.09
Bra033358.1-P Field mustard cytosol, mitochondrion 59.15 60.0
CDX89931 Canola cytosol, mitochondrion 59.15 60.0
AT4G02520.1 Thale cress cytosol, mitochondrion 59.62 59.91
CDX90934 Canola cytosol, mitochondrion 59.15 59.15
CDY50374 Canola cytosol, mitochondrion 59.15 59.15
AT1G02930.1 Thale cress cytosol 57.75 59.13
AT1G02920.1 Thale cress cytosol 57.75 58.85
CDX90933 Canola cytosol 58.69 58.69
Bra000875.1-P Field mustard cytosol 58.69 58.69
CDY18016 Canola cytosol, mitochondrion 58.69 58.69
CDY18015 Canola cytosol 58.69 58.69
CDY50375 Canola cytosol, mitochondrion 58.22 58.22
Bra000876.1-P Field mustard cytosol, mitochondrion 58.22 58.22
CDX95731 Canola cytosol 57.75 57.21
Bra000460.1-P Field mustard cytosol 57.28 56.74
AT2G47730.2 Thale cress plastid 61.03 49.43
CDY71513 Canola plastid 58.22 46.97
CDY07846 Canola cytosol 45.54 44.5
Bra032578.1-P Field mustard cytosol 50.7 44.44
Bra024517.1-P Field mustard cytosol 36.62 43.82
CDY32486 Canola cytosol, mitochondrion 50.7 43.03
CDY37454 Canola cytosol, mitochondrion 50.7 43.03
AT1G02950.5 Thale cress cytosol 51.17 42.75
CDX89927 Canola cytosol 50.7 42.69
PGSC0003DMT400075626 Potato cytosol 44.13 42.53
Bra033359.1-P Field mustard endoplasmic reticulum 47.89 41.13
Bra033361.1-P Field mustard cytosol 35.68 40.64
PGSC0003DMT400043105 Potato cytosol, endoplasmic reticulum 39.91 36.96
AT1G02940.2 Thale cress endoplasmic reticulum 47.42 35.94
CDY07850 Canola cytosol, plastid 50.23 32.13
CDY18136 Canola cytosol 49.77 31.83
Bra033360.1-P Field mustard endoplasmic reticulum 2.82 3.05
CDX89928 Canola endoplasmic reticulum 2.82 2.48
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10EntrezGene:102583107
MapMan:18.8.1.5Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0016740InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_N
InterPro:IPR004045InterPro:IPR010987UniProt:M1B647PFAM:PF00043PFAM:PF02798EnsemblPlantsGene:PGSC0003DMG400014627
PGSC:PGSC0003DMG400014627EnsemblPlants:PGSC0003DMT400037918PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF7
SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI00029682AARefSeq:XP_006355799.1:
Description
Glutathione S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400014627]
Coordinates
chr6:-:547636..549844
Molecular Weight (calculated)
23834.1 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.138
Length
213 amino acids
Sequence
(BLAST)
001: MVIKVHGPMM SPAVMRVVAT LKEKDLDFEL VPVNMQSGDH KKEPFISLNP FGQVPAFEDG DLKLFESRAI TQYIAHTYAD KGTQLLPNDP KKMAIMSVWM
101: EVEAQKFDPI GSKLGFEIVI KPMLGMVTDD AVVAENEEKL GKLLDVYESR LKESKYLGGE SFTLADLHHA PSLHYLMGSK VKSLFDARPH VSAWCADILA
201: RPAWCKTLEL SKQ
Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
Arabidopsis Description
GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.