Factsheet for Bra024517.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07846	Canola	cytosol	79.78	65.14
Bra033361.1-P	Field mustard	cytosol	65.73	62.57
AT1G02950.5	Thale cress	cytosol	71.35	49.8
Bra032578.1-P	Field mustard	cytosol	66.29	48.56
Bra030515.1-P	Field mustard	cytosol, mitochondrion	53.37	45.24
Bra033358.1-P	Field mustard	cytosol, mitochondrion	52.81	44.76
Bra036260.1-P	Field mustard	cytosol, mitochondrion	53.37	44.6
Bra000876.1-P	Field mustard	cytosol, mitochondrion	52.25	43.66
Bra036259.1-P	Field mustard	cytosol, mitochondrion	51.69	43.19
Bra018543.1-P	Field mustard	cytosol, mitochondrion	51.12	42.72
Bra000875.1-P	Field mustard	cytosol	49.44	41.31
Solyc09g074850.2.1	Tomato	cytosol	46.07	41.0
VIT_07s0005g00010.t01	Wine grape	cytosol	45.51	37.85
PGSC0003DMT400029561	Potato	cytosol	44.94	37.38
Solyc06g009020.2.1	Tomato	plastid	43.82	36.62
PGSC0003DMT400037918	Potato	cytosol	43.82	36.62
Bra004434.1-P	Field mustard	cytosol	41.01	36.5
VIT_07s0005g00030.t01	Wine grape	cytosol	43.26	35.98
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.57	34.91
Bra033359.1-P	Field mustard	endoplasmic reticulum	48.31	34.68
Bra000460.1-P	Field mustard	cytosol	41.01	33.95
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	38.76	32.09
Bra037204.1-P	Field mustard	cytosol	45.51	31.89
Bra008570.1-P	Field mustard	cytosol	36.52	30.52
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.08	30.14
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	34.27	29.05
Bra022816.1-P	Field mustard	endoplasmic reticulum	33.15	27.44
Bra021673.1-P	Field mustard	cytosol, mitochondrion	31.46	26.05
Bra022815.1-P	Field mustard	cytosol	30.9	25.58
Bra033360.1-P	Field mustard	endoplasmic reticulum	5.62	5.08

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra024517	EnsemblPlants:Bra024517.1	EnsemblPlants:Bra024517.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4E6W2	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000253F016	SEG:seg	:	:	:	:

Description

AT1G02950 (E=3e-064) ATGSTF4, GST31 | ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4); glutathione transferase

Coordinates

chrA06:+:16363726..16364373

Molecular Weight (calculated)

20871.2 Da

IEP (calculated)

5.274

GRAVY (calculated)

-0.221

Length

178 amino acids

Sequence
(BLAST)

001: MLLLMQPFGQ VPVFEDENVK LFESRAITQY IAYLHSARGT QLLSLESEET LATLTMWMEI EAHQFDPFAS RLTWEQVIKP LYGLETDHTV VKENEAGLEQ
101: VLNVYEKRLG ESRFLACNTF TLVDLHHLPN IQYLLETPTK GLLENRPRVR MWVDEITSKN RRHLLSFHQF LQDIIQNL

Best Arabidopsis Sequence Match ( AT1G02950.2 )
(BLAST)

001: MDCLQMVFKL FPNWKREAEV KKLVAGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE SRAITQYIAY
101: VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV DLHHLPNIQY
201: LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN

Arabidopsis Description

ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.