Factsheet for Bra000876.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90934	Canola	cytosol, mitochondrion	98.59	98.59
CDY18016	Canola	cytosol, mitochondrion	98.12	98.12
AT4G02520.1	Thale cress	cytosol, mitochondrion	85.45	85.85
AT2G02930.1	Thale cress	cytosol, mitochondrion	85.45	85.85
Bra036260.1-P	Field mustard	cytosol, mitochondrion	85.45	85.45
Bra018543.1-P	Field mustard	cytosol, mitochondrion	85.45	85.45
Bra000875.1-P	Field mustard	cytosol	84.98	84.98
Bra036259.1-P	Field mustard	cytosol, mitochondrion	84.98	84.98
Bra030515.1-P	Field mustard	cytosol, mitochondrion	74.18	75.24
Bra033358.1-P	Field mustard	cytosol, mitochondrion	72.77	73.81
VIT_07s0005g00010.t01	Wine grape	cytosol	59.15	58.88
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	58.22	58.49
PGSC0003DMT400037918	Potato	cytosol	58.22	58.22
Solyc06g009020.2.1	Tomato	plastid	57.75	57.75
VIT_07s0005g00030.t01	Wine grape	cytosol	57.28	57.01
Bra004434.1-P	Field mustard	cytosol	53.05	56.5
PGSC0003DMT400029561	Potato	cytosol	55.4	55.14
Solyc09g074850.2.1	Tomato	cytosol	51.64	55.0
Bra024517.1-P	Field mustard	cytosol	43.66	52.25
Bra000460.1-P	Field mustard	cytosol	52.58	52.09
Bra032578.1-P	Field mustard	cytosol	58.22	51.03
Bra033361.1-P	Field mustard	cytosol	40.38	45.99
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.95	45.66
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	44.13	43.72
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	42.72	43.33
Bra008570.1-P	Field mustard	cytosol	42.25	42.25
Bra033359.1-P	Field mustard	endoplasmic reticulum	48.36	41.53
Bra021673.1-P	Field mustard	cytosol, mitochondrion	40.85	40.47
Bra037204.1-P	Field mustard	cytosol	47.89	40.16
Bra022815.1-P	Field mustard	cytosol	40.38	40.0
Bra022816.1-P	Field mustard	endoplasmic reticulum	37.09	36.74
Bra033360.1-P	Field mustard	endoplasmic reticulum	2.82	3.05

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra000876	EnsemblPlants:Bra000876.1	EnsemblPlants:Bra000876.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4C9J7	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00025405A2	SEG:seg	:	:	:	:

Description

AT4G02520 (E=6e-095) ATGSTF2, ATPM24.1, ATPM24, GST2 | ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2); glutathione binding / glutathione transferase

Coordinates

chrA03:+:13645108..13646213

Molecular Weight (calculated)

24160.1 Da

IEP (calculated)

6.871

GRAVY (calculated)

-0.260

Length

213 amino acids

Sequence
(BLAST)

001: MAGIKVFGHA ASISTRRVLL TLHEKNLDFE LVHVDLKDGE HKTESFLSHN PFGKVPAFED GDLKLFESRA ITQYIAPRYE GQGTNLLQPD SKNLAQYAIM
101: AMGMQVEAHQ FDPLASKLAW EHVFKLIYGL TTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGDTFTLTD LHHIPAVQYL LETPTKKLFT ERPHVNKWVA
201: EITKRPASQK ILQ

Best Arabidopsis Sequence Match ( AT4G02520.1 )
(BLAST)

001: MAGIKVFGHP ASIATRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLQTD SKNISQYAIM
101: AIGMQVEDHQ FDPVASKLAF EQIFKSIYGL TTDEAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPAIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VQ

Arabidopsis Description

GSTF2Glutathione S-transferase F2 [Source:UniProtKB/Swiss-Prot;Acc:P46422]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.