Factsheet for Bra023602.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85469	Canola	cytosol, mitochondrion	99.53	99.53
Bra008570.1-P	Field mustard	cytosol	89.3	90.14
AT5G17220.1	Thale cress	cytosol	84.19	84.58
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.51	68.1
VIT_04s0079g00690.t01	Wine grape	mitochondrion	56.74	57.28
KRH30892	Soybean	cytosol	56.28	56.81
KRG97999	Soybean	cytosol	54.88	55.4
VIT_04s0079g00710.t01	Wine grape	cytosol	53.02	53.52
GSMUA_Achr4P11730_001	Banana	cytosol	51.16	49.77
Bra000875.1-P	Field mustard	cytosol	45.12	45.54
Bra036259.1-P	Field mustard	cytosol, mitochondrion	44.19	44.6
Bra000876.1-P	Field mustard	cytosol, mitochondrion	43.72	44.13
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	46.98	43.91
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	46.51	43.48
Bra021673.1-P	Field mustard	cytosol, mitochondrion	42.79	42.79
Bra018543.1-P	Field mustard	cytosol, mitochondrion	42.33	42.72
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	43.26	42.47
Bra022815.1-P	Field mustard	cytosol	42.33	42.33
Bra036260.1-P	Field mustard	cytosol, mitochondrion	41.86	42.25
Bra004434.1-P	Field mustard	cytosol	39.07	42.0
Bra022816.1-P	Field mustard	endoplasmic reticulum	41.4	41.4
Bra030515.1-P	Field mustard	cytosol, mitochondrion	39.07	40.0
Bra000460.1-P	Field mustard	cytosol	39.53	39.53
Bra033358.1-P	Field mustard	cytosol, mitochondrion	38.6	39.52
Bra024517.1-P	Field mustard	cytosol	32.09	38.76
Bra032578.1-P	Field mustard	cytosol	39.53	34.98
Bra033359.1-P	Field mustard	endoplasmic reticulum	40.0	34.68
Bra037204.1-P	Field mustard	cytosol	40.93	34.65
Bra033361.1-P	Field mustard	cytosol	28.37	32.62
GSMUA_Achr4P04940_001	Banana	cytosol	46.98	22.15
Bra033360.1-P	Field mustard	endoplasmic reticulum	1.4	1.52

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EnsemblPlantsGene:Bra023602	EnsemblPlants:Bra023602.1	EnsemblPlants:Bra023602.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M4E499	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI00025430BD	:	:	:	:	:

Description

AT5G17220 (E=8e-105) ATGSTF12, GST26, TT19 | ATGSTF12 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12); glutathione transferase

Coordinates

chrA02:+:4150147..4150954

Molecular Weight (calculated)

24737.2 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.082

Length

215 amino acids

Sequence
(BLAST)

001: MVVKLYGLVT AACPQRVLLC FLEKEIEFEI VHVDLDTLEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKYSN QGTNLLGKSL EHRAIVDQWA
101: DVETHYFNVL AFPIVLNLVI KPRLGEECDA VLVEELKAKL GVVLDIYENR LASNRFLAGD EFTMADLTHM PAMGYLMRTD VNQMVKARVN MNRWWEELTA
201: RPAWKKLMKM AGFEA

Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)

001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH

Arabidopsis Description

GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.