Factsheet for VIT_04s0079g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0079g00710.t01	Wine grape	cytosol	75.59	75.59
KRH30892	Soybean	cytosol	73.24	73.24
KRG97999	Soybean	cytosol	72.77	72.77
AT3G03190.1	Thale cress	cytosol	59.15	58.88
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	63.38	58.7
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	62.91	58.26
Bra008570.1-P	Field mustard	cytosol	58.22	58.22
CDX69395	Canola	cytosol	58.22	58.22
CDY16947	Canola	cytosol	58.22	58.22
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	57.28	58.1
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.81	57.62
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	56.34	57.14
GSMUA_Achr4P11730_001	Banana	cytosol	59.15	57.01
AT5G17220.1	Thale cress	cytosol	57.28	57.01
CDX85469	Canola	cytosol, mitochondrion	57.28	56.74
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	57.28	56.74
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	55.87	55.09
CDY02726	Canola	cytosol	54.46	54.21
VIT_12s0028g00920.t01	Wine grape	cytosol	53.99	53.49
VIT_18s0001g00690.t01	Wine grape	cytosol	52.11	49.78
VIT_07s0104g01800.t01	Wine grape	cytosol	48.83	47.93
VIT_07s0104g01810.t01	Wine grape	cytosol	48.83	47.93
VIT_07s0005g00010.t01	Wine grape	cytosol	44.6	44.39
VIT_07s0005g00030.t01	Wine grape	cytosol	44.13	43.93
VIT_07s0104g01820.t01	Wine grape	cytosol	42.25	41.47
VIT_07s0104g01830.t01	Wine grape	cytosol	38.5	38.14
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	54.93	34.21
GSMUA_Achr4P04940_001	Banana	cytosol	55.4	25.88

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100232976
wikigene:100232976	MapMan:18.8.1.5	Gene3D:3.40.30.10	ProteinID:AAX81329	ProteinID:AAX81329.1	EMBL:AY971515
ProteinID:CBI27362	ProteinID:CBI27362.3	EMBL:FN595753	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	EntrezGene:GST4
wikigene:GST4	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	RefSeq:NP_001267869.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	UniProt:Q56AY1	SUPFAM:SSF47616	SUPFAM:SSF52833
TIGR:TC69505	InterPro:Thioredoxin-like_sf	UniParc:UPI0000505379	ArrayExpress:VIT_04s0079g00690	EnsemblPlantsGene:VIT_04s0079g00690	EnsemblPlants:VIT_04s0079g00690.t01
unigene:Vvi.574	:	:	:	:	:

Description

Glutathione S-transferase [Source:UniProtKB/TrEMBL;Acc:Q56AY1]

Coordinates

chr4:-:11505001..11507285

Molecular Weight (calculated)

24223.3 Da

IEP (calculated)

5.698

GRAVY (calculated)

-0.107

Length

213 amino acids

Sequence
(BLAST)

001: MVMKVYGPVR AACPQRVLAC LVEKGVEFEV VHVDLDSGEQ KRPDFLLRQP FGQVPVVEDG DFRLFESRAI VRYIAAKYAE QGPDLLGKSL EEKAVVDQWL
101: EVEAHNFNEL VYTLVMQLVI LPRMGERGDL ALAHTCEQKL EKVFDVYEQR LSKSRYLAGD SFTLADLSHL PAIRYLVKEA GMAHLVTERK SVSAWWEDIS
201: NRAAWKKVME LAA

Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)

001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH

Arabidopsis Description

GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.