Factsheet for VIT_07s0104g01830.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0104g01820.t01	Wine grape	cytosol	52.56	52.07
VIT_07s0005g00030.t01	Wine grape	cytosol	45.58	45.79
VIT_07s0005g00010.t01	Wine grape	cytosol	44.65	44.86
VIT_12s0028g00920.t01	Wine grape	cytosol	40.93	40.93
VIT_18s0001g00690.t01	Wine grape	cytosol	41.4	39.91
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	40.0	39.81
VIT_04s0079g00690.t01	Wine grape	mitochondrion	38.14	38.5
VIT_07s0104g01800.t01	Wine grape	cytosol	38.6	38.25
VIT_07s0104g01810.t01	Wine grape	cytosol	37.67	37.33
VIT_04s0079g00710.t01	Wine grape	cytosol	36.28	36.62

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100252749
wikigene:100252749	MapMan:18.8.1.5	Gene3D:3.40.30.10	ProteinID:CCB56740	ProteinID:CCB56740.1	UniProt:F6HPY4
EMBL:FN596005	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100252749	wikigene:LOC100252749
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7
SUPFAM:SSF47616	SUPFAM:SSF52833	TIGR:TC57781	InterPro:Thioredoxin-like_sf	UniParc:UPI0002108571	ArrayExpress:VIT_07s0104g01830
EnsemblPlantsGene:VIT_07s0104g01830	EnsemblPlants:VIT_07s0104g01830.t01	unigene:Vvi.15029	RefSeq:XP_002263462	RefSeq:XP_002263462.2	RefSeq:XP_003632349
RefSeq:XP_003632349.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7:+:2818024..2819057

Molecular Weight (calculated)

24709.9 Da

IEP (calculated)

4.941

GRAVY (calculated)

-0.294

Length

215 amino acids

Sequence
(BLAST)

001: MAVRKLYGAL DSPSTMRALA SLFEHDVEFE LIPVDFQAGE LKKMPSLSPF GELPVFQEGD LTLFESRTIM RYISHEYGKR GEEQVYEIPK LQGIAAAWID
101: VEDHQFDPPA SKLIWELVFK PQKGLPTDEG VVEEEEAKLV KVLDVYEERL SNSVFLGGDK FTSADLTHIP SLYLLMKTPV KRLFEERPRV RAWYRGVMSR
201: PGWEKMVEMV EKVRA

Best Arabidopsis Sequence Match ( AT4G02520.1 )
(BLAST)

001: MAGIKVFGHP ASIATRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLQTD SKNISQYAIM
101: AIGMQVEDHQ FDPVASKLAF EQIFKSIYGL TTDEAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPAIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VQ

Arabidopsis Description

GSTF2Glutathione S-transferase F2 [Source:UniProtKB/Swiss-Prot;Acc:P46422]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.