Factsheet for VIT_12s0028g00920.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	80.93	80.56
KRG98977	Soybean	cytosol	63.26	75.56
KRH14517	Soybean	endoplasmic reticulum	72.56	72.56
KRH46010	Soybean	cytosol	72.56	72.22
KRH46009	Soybean	cytosol	71.63	71.63
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	71.63	71.63
KRH73614	Soybean	endoplasmic reticulum	71.16	71.16
KRH73613	Soybean	cytosol	53.95	69.88
KRG98975	Soybean	cytosol	58.6	66.67
AT2G30860.1	Thale cress	cytosol	64.19	64.19
CDY23980	Canola	cytosol	63.72	63.72
CDX97788	Canola	cytosol	63.72	63.72
CDX84816	Canola	cytosol	63.72	63.72
Bra022815.1-P	Field mustard	cytosol	63.72	63.72
CDY29636	Canola	cytosol	63.26	63.26
KRH14516	Soybean	cytosol	40.0	63.24
Bra021673.1-P	Field mustard	cytosol, mitochondrion	62.33	62.33
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	61.4	61.4
Bra022816.1-P	Field mustard	endoplasmic reticulum	61.4	61.4
CDY23979	Canola	endoplasmic reticulum	60.93	60.93
CDX84815	Canola	cytosol, endoplasmic reticulum	60.93	60.93
VIT_04s0079g00690.t01	Wine grape	mitochondrion	53.49	53.99
VIT_04s0079g00710.t01	Wine grape	cytosol	50.23	50.7
VIT_18s0001g00690.t01	Wine grape	cytosol	49.77	47.98
VIT_07s0104g01800.t01	Wine grape	cytosol	47.91	47.47
VIT_07s0104g01810.t01	Wine grape	cytosol	47.91	47.47
VIT_07s0005g00030.t01	Wine grape	cytosol	43.72	43.93
VIT_07s0005g00010.t01	Wine grape	cytosol	43.26	43.46
VIT_07s0104g01830.t01	Wine grape	cytosol	40.93	40.93
VIT_07s0104g01820.t01	Wine grape	cytosol	40.93	40.55

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100233042
wikigene:100233042	MapMan:18.8.1.5	Gene3D:3.40.30.10	MapMan:9.5.1.6.4	UniProt:A4LAG9	ProteinID:AAN85828
ProteinID:AAN85828.1	ProteinID:ABO64930	ProteinID:ABO64930.1	ProteinID:ABW34389	ProteinID:ABW34389.1	EMBL:AY156050
ProteinID:CBI22081	ProteinID:CBI22081.3	EMBL:EF469244	EMBL:EU181421	EMBL:FN595235	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	EntrezGene:GST3	wikigene:GST3	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	RefSeq:NP_001267983.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF15	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0000F6E40F	ArrayExpress:VIT_12s0028g00920	EnsemblPlantsGene:VIT_12s0028g00920	EnsemblPlants:VIT_12s0028g00920.t01
unigene:Vvi.17666	:	:	:	:	:

Description

Glutathione S-transferase [Source:UniProtKB/TrEMBL;Acc:A4LAG9]

Coordinates

chr12:-:1434315..1435713

Molecular Weight (calculated)

24967.2 Da

IEP (calculated)

5.839

GRAVY (calculated)

-0.305

Length

215 amino acids

Sequence
(BLAST)

001: MVVKVYGPDF ASAKRVLVCL IEKEVEFETL PIDIIKGQNK DPEFLKLQPF GVVPVIQDGD YTLFESRAIM RYYAEKYKSQ GTDLLGKTIE ERGVVEQWLE
101: VEAQSYHPAI DNLVIEILFG RKRGIPPDAK VIEESEKKLA KVLDIYEERL SKSKYLAGDF FSLADLSHLP FTKYLADMGK MYLIEERKHV KAWWDDISNR
201: PSWKKVFSSR WPLLE

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.