CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022816.1-P	Field mustard	endoplasmic reticulum	99.07	99.07
CDY23979	Canola	endoplasmic reticulum	99.07	99.07
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	94.88	94.88
CDX84816	Canola	cytosol	78.6	78.6
CDY23980	Canola	cytosol	78.6	78.6
CDY29636	Canola	cytosol	77.67	77.67
CDX97788	Canola	cytosol	77.67	77.67
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	63.72	63.43
KRH46009	Soybean	cytosol	61.4	61.4
VIT_12s0028g00920.t01	Wine grape	cytosol	60.93	60.93
KRG98977	Soybean	cytosol	50.7	60.56
KRH46010	Soybean	cytosol	60.0	59.72
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	59.53	59.53
KRH73613	Soybean	cytosol	45.12	58.43
KRH73614	Soybean	endoplasmic reticulum	58.14	58.14
KRH14517	Soybean	endoplasmic reticulum	58.14	58.14
KRH14516	Soybean	cytosol	36.74	58.09
KRG98975	Soybean	cytosol	50.23	57.14
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	46.98	48.1
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	45.58	46.67
CDX69395	Canola	cytosol	40.93	41.31
CDY16947	Canola	cytosol	40.93	41.31
CDX85469	Canola	cytosol, mitochondrion	40.93	40.93
CDY53015	Canola	cytosol	37.67	40.5
CDY02726	Canola	cytosol	40.0	40.19
CDX93963	Canola	cytosol	40.47	39.73
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.07	38.36
CDX90933	Canola	cytosol	37.67	38.03
CDY18015	Canola	cytosol	37.67	38.03
CDY18016	Canola	cytosol, mitochondrion	37.21	37.56
CDX80129	Canola	cytosol	37.67	37.5
CDX90934	Canola	cytosol, mitochondrion	36.74	37.09
CDY65569	Canola	cytosol, mitochondrion	36.28	36.62
CDX95731	Canola	cytosol	36.28	36.28
CDY18131	Canola	cytosol, mitochondrion	35.35	36.19
CDX89931	Canola	cytosol, mitochondrion	35.35	36.19
CDX97273	Canola	cytosol, mitochondrion	35.81	36.15
CDY50374	Canola	cytosol, mitochondrion	35.81	36.15
CDY15444	Canola	cytosol, mitochondrion	34.88	35.71
CDY22058	Canola	cytosol, mitochondrion	34.88	35.21
CDY50375	Canola	cytosol, mitochondrion	33.02	33.33
CDY37204	Canola	cytosol	37.67	31.89
CDY37454	Canola	cytosol, mitochondrion	35.81	30.68
CDY07846	Canola	cytosol	30.7	30.28
CDY32486	Canola	cytosol, mitochondrion	34.88	29.88
CDX89927	Canola	cytosol	34.88	29.64
CDY71513	Canola	plastid	36.28	29.55
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	40.0	25.15
CDY18136	Canola	cytosol	34.42	22.22
CDY07850	Canola	cytosol, plastid	33.95	21.92
CDX89928	Canola	endoplasmic reticulum	0.93	0.83
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	MapMan:9.5.1.6.4	EnsemblPlants:CDX84815	ProteinID:CDX84815	ProteinID:CDX84815.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00142119001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF15	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EE155E	:	:	:	:

Description

BnaA03g14150D

Coordinates

chrLK031838:-:1381896..1383348

Molecular Weight (calculated)

24359.4 Da

IEP (calculated)

5.011

GRAVY (calculated)

-0.125

Length

215 amino acids

Sequence
(BLAST)

001: MVLTIYAPLF ASSKRAVVTL VEKGVEFETV NVDLMKGEQR QPEYMAIHPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLG EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGAIG KGYMIKDRKH VSAWWDKISN
201: RAAWKEVSEK YALPV

Best Arabidopsis Sequence Match ( AT2G30870.1 )
(BLAST)

001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV

Arabidopsis Description

GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.