Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004434.1-P | Field mustard | cytosol | 91.67 | 99.0 |
| CDY53015 | Canola | cytosol | 88.43 | 95.5 |
| CDX95731 | Canola | cytosol | 82.41 | 82.79 |
| CDY71513 | Canola | plastid | 81.48 | 66.67 |
| AT2G47730.2 | Thale cress | plastid | 79.17 | 65.02 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 62.04 | 62.62 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 61.57 | 62.15 |
| PGSC0003DMT400037918 | Potato | cytosol | 60.19 | 61.03 |
| Solyc06g009020.2.1 | Tomato | plastid | 59.26 | 60.09 |
| KRH71552 | Soybean | cytosol | 58.8 | 58.26 |
| CDY65569 | Canola | cytosol, mitochondrion | 57.41 | 58.22 |
| CDX97273 | Canola | cytosol, mitochondrion | 57.41 | 58.22 |
| CDX89931 | Canola | cytosol, mitochondrion | 56.02 | 57.62 |
| CDY18131 | Canola | cytosol, mitochondrion | 56.02 | 57.62 |
| CDY15444 | Canola | cytosol, mitochondrion | 56.02 | 57.62 |
| PGSC0003DMT400029561 | Potato | cytosol | 56.94 | 57.48 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 55.56 | 56.6 |
| Solyc09g074850.2.1 | Tomato | cytosol | 52.31 | 56.5 |
| CDY18016 | Canola | cytosol, mitochondrion | 55.09 | 55.87 |
| CDX90933 | Canola | cytosol | 55.09 | 55.87 |
| CDX90934 | Canola | cytosol, mitochondrion | 55.09 | 55.87 |
| CDY50374 | Canola | cytosol, mitochondrion | 54.63 | 55.4 |
| CDY18015 | Canola | cytosol | 54.17 | 54.93 |
| CDY22058 | Canola | cytosol, mitochondrion | 53.7 | 54.46 |
| CDY50375 | Canola | cytosol, mitochondrion | 52.78 | 53.52 |
| CDY37454 | Canola | cytosol, mitochondrion | 52.78 | 45.42 |
| CDY32486 | Canola | cytosol, mitochondrion | 52.31 | 45.02 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.37 | 44.75 |
| CDY07846 | Canola | cytosol | 44.44 | 44.04 |
| CDX93963 | Canola | cytosol | 44.44 | 43.84 |
| CDX89927 | Canola | cytosol | 50.93 | 43.48 |
| CDY29636 | Canola | cytosol | 40.28 | 40.47 |
| CDX97788 | Canola | cytosol | 40.28 | 40.47 |
| CDX85469 | Canola | cytosol, mitochondrion | 40.28 | 40.47 |
| CDY23980 | Canola | cytosol | 39.81 | 40.0 |
| CDX84816 | Canola | cytosol | 39.81 | 40.0 |
| CDY02726 | Canola | cytosol | 39.35 | 39.72 |
| CDY16947 | Canola | cytosol | 38.89 | 39.44 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 37.5 | 38.57 |
| CDX69395 | Canola | cytosol | 37.96 | 38.5 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 37.5 | 37.67 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 36.57 | 37.62 |
| CDY37204 | Canola | cytosol | 43.98 | 37.4 |
| CDY23979 | Canola | endoplasmic reticulum | 37.04 | 37.21 |
| CDY18136 | Canola | cytosol | 50.93 | 33.03 |
| CDY07850 | Canola | cytosol, plastid | 50.0 | 32.43 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.81 | 25.15 |
| CDX89928 | Canola | endoplasmic reticulum | 1.39 | 1.24 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EnsemblPlants:CDX80129 | ProteinID:CDX80129 | ProteinID:CDX80129.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00133036001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EE4AB4 | : | : | : | : | : |
Description
BnaA05g00270D
Coordinates
chrLK031819:+:2035915..2036846
Molecular Weight (calculated)
24126.6 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.048
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGIKVHGV PISTATMRVL ATLYEKGLDF ELVPVDMKAG AHKQEPLISL NPFGQIPALL DGDLTLFESR AITEYIADEY NNKGEKLLCQ SCKKLKAITK
101: VWLQVEGQQF DPIASKLAFE RVFKGMLGMT TDPAAVEDLE AKLVKVLDIY EARLSKSPFL AGDCFTLADL HHLPIIYYLM GTDSKKLFES RPKVSEWIKK
201: ITARPSWVKV LNLQKQ
101: VWLQVEGQQF DPIASKLAFE RVFKGMLGMT TDPAAVEDLE AKLVKVLDIY EARLSKSPFL AGDCFTLADL HHLPIIYYLM GTDSKKLFES RPKVSEWIKK
201: ITARPSWVKV LNLQKQ
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
Arabidopsis Description
GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.