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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 5
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022816.1-P Field mustard endoplasmic reticulum 99.07 99.07
CDX84815 Canola cytosol, endoplasmic reticulum 99.07 99.07
AT2G30870.1 Thale cress endoplasmic reticulum, vacuole 94.88 94.88
CDX84816 Canola cytosol 78.6 78.6
CDY23980 Canola cytosol 78.6 78.6
CDY29636 Canola cytosol 77.67 77.67
CDX97788 Canola cytosol 77.67 77.67
VIT_12s0028g00930.t01 Wine grape cytosol, endoplasmic reticulum 63.72 63.43
KRH46009 Soybean cytosol 61.4 61.4
VIT_12s0028g00920.t01 Wine grape cytosol 60.93 60.93
KRG98977 Soybean cytosol 50.7 60.56
KRH46010 Soybean cytosol 60.0 59.72
KRG98976 Soybean cytosol, endoplasmic reticulum, mitochondrion 59.53 59.53
KRH14516 Soybean cytosol 37.21 58.82
KRH73613 Soybean cytosol 45.12 58.43
KRH73614 Soybean endoplasmic reticulum 58.14 58.14
KRH14517 Soybean endoplasmic reticulum 58.14 58.14
KRG98975 Soybean cytosol 50.23 57.14
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 46.98 48.1
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 45.58 46.67
CDY16947 Canola cytosol 41.86 42.25
CDX69395 Canola cytosol 40.93 41.31
CDX85469 Canola cytosol, mitochondrion 40.93 40.93
CDY02726 Canola cytosol 40.0 40.19
CDY53015 Canola cytosol 37.21 40.0
CDX93963 Canola cytosol 40.0 39.27
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 38.6 37.9
CDY18015 Canola cytosol 37.21 37.56
CDX90933 Canola cytosol 37.21 37.56
CDY18016 Canola cytosol, mitochondrion 36.74 37.09
CDX80129 Canola cytosol 37.21 37.04
CDX90934 Canola cytosol, mitochondrion 36.28 36.62
CDY65569 Canola cytosol, mitochondrion 35.81 36.15
CDX95731 Canola cytosol 35.81 35.81
CDX89931 Canola cytosol, mitochondrion 34.88 35.71
CDY18131 Canola cytosol, mitochondrion 34.88 35.71
CDX97273 Canola cytosol, mitochondrion 35.35 35.68
CDY50374 Canola cytosol, mitochondrion 35.35 35.68
CDY15444 Canola cytosol, mitochondrion 34.42 35.24
CDY22058 Canola cytosol, mitochondrion 34.42 34.74
CDY50375 Canola cytosol, mitochondrion 32.56 32.86
CDY37204 Canola cytosol 37.21 31.5
CDY37454 Canola cytosol, mitochondrion 35.35 30.28
CDY07846 Canola cytosol 30.23 29.82
CDY32486 Canola cytosol, mitochondrion 34.42 29.48
CDX89927 Canola cytosol 34.42 29.25
CDY71513 Canola plastid 35.81 29.17
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 40.0 25.15
CDY18136 Canola cytosol 33.95 21.92
CDY07850 Canola cytosol, plastid 33.49 21.62
CDX89928 Canola endoplasmic reticulum 0.93 0.83
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10MapMan:9.5.1.6.4UniProt:A0A078GF54EnsemblPlants:CDY23979ProteinID:CDY23979ProteinID:CDY23979.1
GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00024491001InterPro:GST_CInterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043
PFAM:PF02798PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF15SUPFAM:SSF47616
SUPFAM:SSF52833InterPro:Thioredoxin-like_sfUniParc:UPI0004EC449D:::
Description
BnaC03g17120DBnaC03g17120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF54]
Coordinates
chrLK032152:-:270634..272089
Molecular Weight (calculated)
24336.4 Da
IEP (calculated)
4.876
GRAVY (calculated)
-0.127
Length
215 amino acids
Sequence
(BLAST)
001: MVLTIYAPLF ASSKRAVVTL VEKGVEFETV NVDLMKGEQR QPEYMAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLG EVLDVYDAQL SKNEYLAGDF VSLADLAHLP FTEYLVGAIG KGYMIKDRKH VSAWWDKISN
201: RAAWKEVSEK YALPV
Best Arabidopsis Sequence Match ( AT2G30870.1 )
(BLAST)
001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV
Arabidopsis Description
GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.