CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14517	Soybean	endoplasmic reticulum	96.74	96.74
KRH14516	Soybean	cytosol	49.77	78.68
KRH73613	Soybean	cytosol	59.07	76.51
VIT_12s0028g00930.t01	Wine grape	cytosol, endoplasmic reticulum	75.81	75.46
KRG98977	Soybean	cytosol	60.93	72.78
VIT_12s0028g00920.t01	Wine grape	cytosol	71.16	71.16
KRH46010	Soybean	cytosol	71.16	70.83
KRH46009	Soybean	cytosol	70.23	70.23
KRG98976	Soybean	cytosol, endoplasmic reticulum, mitochondrion	69.3	69.3
KRG98975	Soybean	cytosol	57.67	65.61
CDY29636	Canola	cytosol	62.79	62.79
CDX97788	Canola	cytosol	62.79	62.79
CDY23980	Canola	cytosol	62.33	62.33
CDX84816	Canola	cytosol	62.33	62.33
Bra022815.1-P	Field mustard	cytosol	62.33	62.33
Bra021673.1-P	Field mustard	cytosol, mitochondrion	61.86	61.86
AT2G30860.1	Thale cress	cytosol	61.4	61.4
AT2G30870.1	Thale cress	endoplasmic reticulum, vacuole	59.07	59.07
Bra022816.1-P	Field mustard	endoplasmic reticulum	58.6	58.6
CDX84815	Canola	cytosol, endoplasmic reticulum	58.14	58.14
CDY23979	Canola	endoplasmic reticulum	58.14	58.14
KRH30892	Soybean	cytosol	52.09	52.58
KRG97999	Soybean	cytosol	51.16	51.64
KRH31902	Soybean	cytosol	43.72	43.12
KRH71551	Soybean	cytosol	43.26	42.27
KRH71552	Soybean	cytosol	38.14	37.61

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:100819783
MapMan:18.8.1.5	Gene3D:3.40.30.10	MapMan:9.5.1.6.4	EMBL:ACUP02001285	EnsemblPlantsGene:GLYMA_02G283900	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K7KBB0	EMBL:KM818398	EnsemblPlants:KRH73614	ProteinID:KRH73614
ProteinID:KRH73614.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900
PANTHER:PTHR43900:SF15	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112	MetaCyc:PWY-7533	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002337250	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:46550397..46551943

Molecular Weight (calculated)

24781.9 Da

IEP (calculated)

6.252

GRAVY (calculated)

-0.238

Length

215 amino acids

Sequence
(BLAST)

001: MVVKVYGPHC ASTKRVLVCL VEKEVEFDVV PVDVTKGEQK DPEYLKLQPF GVVPVIKDGD YTLYESRAII RYYAEKYRSQ GAELLGKTIE ERGLVEQWLE
101: VEAHNFHPPA YNLCLHGLFG SLFGVTPDPK VIEESEAKLV QVLNIYEERL SKTKYLAGDF FSIADISHLP FLDYVVNNME KKYLLKERKH VGAWWDDISS
201: RPSWNKVLQL YRAPI

Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)

001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA

Arabidopsis Description

GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.