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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 3
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29636 Canola cytosol 99.53 99.53
CDY23980 Canola cytosol 97.67 97.67
CDX84816 Canola cytosol 97.67 97.67
AT2G30860.1 Thale cress cytosol 97.21 97.21
CDY23979 Canola endoplasmic reticulum 77.67 77.67
CDX84815 Canola cytosol, endoplasmic reticulum 77.67 77.67
VIT_12s0028g00930.t01 Wine grape cytosol, endoplasmic reticulum 66.98 66.67
VIT_12s0028g00920.t01 Wine grape cytosol 63.72 63.72
KRH46009 Soybean cytosol 63.26 63.26
KRH73614 Soybean endoplasmic reticulum 62.79 62.79
KRH14517 Soybean endoplasmic reticulum 62.79 62.79
KRG98977 Soybean cytosol 52.56 62.78
KRH73613 Soybean cytosol 47.91 62.05
KRG98976 Soybean cytosol, endoplasmic reticulum, mitochondrion 61.4 61.4
KRH46010 Soybean cytosol 61.4 61.11
KRH14516 Soybean cytosol 38.6 61.03
KRG98975 Soybean cytosol 51.63 58.73
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 47.44 48.57
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 46.05 47.14
CDX90933 Canola cytosol 42.79 43.19
CDX85469 Canola cytosol, mitochondrion 42.79 42.79
CDX69395 Canola cytosol 42.33 42.72
CDY16947 Canola cytosol 42.33 42.72
CDY18015 Canola cytosol 41.86 42.25
CDY53015 Canola cytosol 39.07 42.0
CDY18016 Canola cytosol, mitochondrion 41.4 41.78
CDX90934 Canola cytosol, mitochondrion 40.93 41.31
CDY15444 Canola cytosol, mitochondrion 40.0 40.95
CDY18131 Canola cytosol, mitochondrion 39.53 40.48
CDY65569 Canola cytosol, mitochondrion 40.0 40.38
CDX80129 Canola cytosol 40.47 40.28
CDY02726 Canola cytosol 40.0 40.19
CDX93963 Canola cytosol 40.93 40.18
CDX89931 Canola cytosol, mitochondrion 39.07 40.0
CDX97273 Canola cytosol, mitochondrion 39.53 39.91
CDY50374 Canola cytosol, mitochondrion 39.07 39.44
CDY22058 Canola cytosol, mitochondrion 39.07 39.44
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 39.53 38.81
CDX95731 Canola cytosol 38.14 38.14
CDY50375 Canola cytosol, mitochondrion 37.67 38.03
CDY37454 Canola cytosol, mitochondrion 37.21 31.87
CDY71513 Canola plastid 38.6 31.44
CDY07846 Canola cytosol 31.63 31.19
CDY37204 Canola cytosol 36.74 31.1
CDY32486 Canola cytosol, mitochondrion 36.28 31.08
CDX89927 Canola cytosol 36.28 30.83
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 40.47 25.44
CDY07850 Canola cytosol, plastid 36.74 23.72
CDY18136 Canola cytosol 35.81 23.12
CDX89928 Canola endoplasmic reticulum 1.4 1.24
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10MapMan:9.5.1.6.4EnsemblPlants:CDX97788ProteinID:CDX97788ProteinID:CDX97788.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00105071001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798
PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF15SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EB7735::::
Description
BnaC04g41510D
Coordinates
chrLK031901:-:349165..350453
Molecular Weight (calculated)
24229.2 Da
IEP (calculated)
6.403
GRAVY (calculated)
-0.150
Length
215 amino acids
Sequence
(BLAST)
001: MVLKVYGPHF ASPKRALVTL IEKGVPFETV PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTFHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA AVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETLEK YSFPA
Best Arabidopsis Sequence Match ( AT2G30860.1 )
(BLAST)
001: MVLKVYGPHF ASPKRALVTL IEKGVAFETI PVDLMKGEHK QPAYLALQPF GTVPAVVDGD YKIFESRAVM RYVAEKYRSQ GPDLLGKTVE DRGQVEQWLD
101: VEATTYHPPL LNLTLHIMFA SVMGFPSDEK LIKESEEKLA GVLDVYEAHL SKSKYLAGDF VSLADLAHLP FTDYLVGPIG KAYMIKDRKH VSAWWDDISS
201: RPAWKETVAK YSFPA
Arabidopsis Description
GSTF9GSTF9 [Source:UniProtKB/TrEMBL;Acc:A0A178VP05]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.