Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32486 | Canola | cytosol, mitochondrion | 99.2 | 99.2 |
| CDX89927 | Canola | cytosol | 79.28 | 78.66 |
| CDY07846 | Canola | cytosol | 66.93 | 77.06 |
| AT1G02950.5 | Thale cress | cytosol | 76.49 | 75.29 |
| CDY18136 | Canola | cytosol | 79.68 | 60.06 |
| CDY18131 | Canola | cytosol, mitochondrion | 49.8 | 59.52 |
| CDX89931 | Canola | cytosol, mitochondrion | 49.8 | 59.52 |
| CDY15444 | Canola | cytosol, mitochondrion | 49.4 | 59.05 |
| CDX90934 | Canola | cytosol, mitochondrion | 49.8 | 58.69 |
| CDY50374 | Canola | cytosol, mitochondrion | 49.4 | 58.22 |
| CDY18016 | Canola | cytosol, mitochondrion | 49.0 | 57.75 |
| CDY22058 | Canola | cytosol, mitochondrion | 48.61 | 57.28 |
| CDX97273 | Canola | cytosol, mitochondrion | 48.21 | 56.81 |
| CDY65569 | Canola | cytosol, mitochondrion | 48.21 | 56.81 |
| CDY50375 | Canola | cytosol, mitochondrion | 47.81 | 56.34 |
| CDX90933 | Canola | cytosol | 46.22 | 54.46 |
| CDY18015 | Canola | cytosol | 45.82 | 53.99 |
| CDY07850 | Canola | cytosol, plastid | 71.31 | 53.75 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 45.82 | 53.74 |
| CDX95731 | Canola | cytosol | 45.42 | 53.02 |
| CDY53015 | Canola | cytosol | 42.23 | 53.0 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 45.02 | 52.8 |
| CDX80129 | Canola | cytosol | 45.42 | 52.78 |
| Solyc09g074850.2.1 | Tomato | cytosol | 41.43 | 52.0 |
| PGSC0003DMT400037918 | Potato | cytosol | 43.03 | 50.7 |
| PGSC0003DMT400029561 | Potato | cytosol | 42.63 | 50.0 |
| Solyc06g009020.2.1 | Tomato | plastid | 42.23 | 49.77 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.43 | 49.06 |
| CDY71513 | Canola | plastid | 46.61 | 44.32 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.86 | 41.1 |
| CDX93963 | Canola | cytosol | 35.46 | 40.64 |
| CDX85469 | Canola | cytosol, mitochondrion | 34.26 | 40.0 |
| CDX69395 | Canola | cytosol | 33.86 | 39.91 |
| CDY02726 | Canola | cytosol | 33.47 | 39.25 |
| CDY16947 | Canola | cytosol | 33.07 | 38.97 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 31.47 | 37.62 |
| CDY37204 | Canola | cytosol | 37.85 | 37.4 |
| CDY29636 | Canola | cytosol | 31.87 | 37.21 |
| CDX97788 | Canola | cytosol | 31.87 | 37.21 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 31.08 | 37.14 |
| CDX84816 | Canola | cytosol | 31.47 | 36.74 |
| CDY23980 | Canola | cytosol | 31.47 | 36.74 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 30.68 | 35.81 |
| CDY23979 | Canola | endoplasmic reticulum | 30.28 | 35.35 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 33.86 | 24.85 |
| CDX89928 | Canola | endoplasmic reticulum | 4.78 | 4.96 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A078HJD5 | EnsemblPlants:CDY37454 | ProteinID:CDY37454 | ProteinID:CDY37454.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00064034001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EB50AD | : | : | : | : |
Description
BnaC08g45920DBnaC08g45920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJD5]
Coordinates
chrLK032400:+:190902..192373
Molecular Weight (calculated)
29341.5 Da
IEP (calculated)
9.168
GRAVY (calculated)
-0.392
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MRYTCHLLMD WTKKVYRLVP NWKRESEVKN LGYKVHGNPF STSTRRVLAV LLEKGLSYES ITVDLKSGEH KTESFLSLNP FGQIPVFVDG NIKLHESRAI
101: TQYIAYVHST RGTQLLYLQS HETMAILTVW MEIEAHQFDP FASKLTWEQA IKPIYGLETD QVVVKENEAN LEKVLDIYEK RLGKYRFLAC NTFTLADLHH
201: LPNIQYLLGT PTKRLFEDRP KVLKWVGEIT GREAWKMACD HEKYWFGKQT K
101: TQYIAYVHST RGTQLLYLQS HETMAILTVW MEIEAHQFDP FASKLTWEQA IKPIYGLETD QVVVKENEAN LEKVLDIYEK RLGKYRFLAC NTFTLADLHH
201: LPNIQYLLGT PTKRLFEDRP KVLKWVGEIT GREAWKMACD HEKYWFGKQT K
001: MQKLNKCIYI VYMDCLQMVF KLFPNWKREA EVKKLGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
Arabidopsis Description
ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.