Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 4
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033361.1-P | Field mustard | cytosol | 58.82 | 80.21 |
| CDX89927 | Canola | cytosol | 78.04 | 78.66 |
| CDY07846 | Canola | cytosol | 66.67 | 77.98 |
| Bra032578.1-P | Field mustard | cytosol | 74.12 | 77.78 |
| CDY37454 | Canola | cytosol, mitochondrion | 75.29 | 76.49 |
| CDY32486 | Canola | cytosol, mitochondrion | 74.51 | 75.7 |
| Bra024517.1-P | Field mustard | cytosol | 49.8 | 71.35 |
| CDY18136 | Canola | cytosol | 77.65 | 59.46 |
| AT2G02930.1 | Thale cress | cytosol, mitochondrion | 49.02 | 58.96 |
| AT1G02920.1 | Thale cress | cytosol | 48.24 | 58.85 |
| AT1G02930.1 | Thale cress | cytosol | 47.06 | 57.69 |
| AT4G02520.1 | Thale cress | cytosol, mitochondrion | 47.84 | 57.55 |
| CDY07850 | Canola | cytosol, plastid | 74.9 | 57.36 |
| Solyc09g074850.2.1 | Tomato | cytosol | 42.75 | 54.5 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 44.31 | 52.8 |
| PGSC0003DMT400029561 | Potato | cytosol | 44.31 | 52.8 |
| AT1G02940.2 | Thale cress | endoplasmic reticulum | 57.65 | 52.31 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 43.14 | 51.4 |
| PGSC0003DMT400037918 | Potato | cytosol | 42.75 | 51.17 |
| Solyc06g009020.2.1 | Tomato | plastid | 42.75 | 51.17 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.57 | 50.0 |
| AT2G47730.2 | Thale cress | plastid | 42.75 | 41.44 |
| AT1G49860.1 | Thale cress | cytosol | 37.65 | 37.8 |
| AT3G03190.1 | Thale cress | cytosol | 31.37 | 37.38 |
| AT3G62760.1 | Thale cress | cytosol | 31.76 | 36.99 |
| AT2G30860.1 | Thale cress | cytosol | 30.59 | 36.28 |
| AT5G17220.1 | Thale cress | cytosol | 30.2 | 35.98 |
| AT2G30870.1 | Thale cress | endoplasmic reticulum, vacuole | 29.41 | 34.88 |
| Bra033360.1-P | Field mustard | endoplasmic reticulum | 4.31 | 5.58 |
| CDX89928 | Canola | endoplasmic reticulum | 3.92 | 4.13 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EntrezGene:838240 | UniProt:A0A1P8AMT5 | ProteinID:ANM57969.1 | ArrayExpress:AT1G02950 | EnsemblPlantsGene:AT1G02950 |
| RefSeq:AT1G02950 | TAIR:AT1G02950 | RefSeq:AT1G02950-TAIR-G | EnsemblPlants:AT1G02950.5 | Symbol:ATGSTF4 | Unigene:At.24805 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0016740 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| RefSeq:NP_001320441.1 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 |
| PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000848465B | : |
Description
ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
Coordinates
chr1:-:665119..666471
Molecular Weight (calculated)
30030.4 Da
IEP (calculated)
9.232
GRAVY (calculated)
-0.473
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MQKLNKCIYI VYMDCLQMVF KLFPNWKREA EVKKLGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.