Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 6
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18134 | Canola | nucleus | 17.77 | 100.0 |
| Bra033360.1-P | Field mustard | endoplasmic reticulum | 77.27 | 94.92 |
| CDY18136 | Canola | cytosol | 28.93 | 21.02 |
| CDX89927 | Canola | cytosol | 5.79 | 5.53 |
| CDY37454 | Canola | cytosol, mitochondrion | 4.96 | 4.78 |
| CDY32486 | Canola | cytosol, mitochondrion | 4.96 | 4.78 |
| AT1G02950.5 | Thale cress | cytosol | 4.13 | 3.92 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 2.89 | 3.27 |
| Solyc09g074850.2.1 | Tomato | cytosol | 2.48 | 3.0 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 2.48 | 2.83 |
| CDX90934 | Canola | cytosol, mitochondrion | 2.48 | 2.82 |
| CDY18016 | Canola | cytosol, mitochondrion | 2.48 | 2.82 |
| PGSC0003DMT400037918 | Potato | cytosol | 2.48 | 2.82 |
| Solyc06g009020.2.1 | Tomato | plastid | 2.48 | 2.82 |
| CDX95731 | Canola | cytosol | 2.48 | 2.79 |
| CDY37204 | Canola | cytosol | 2.89 | 2.76 |
| CDY07846 | Canola | cytosol | 2.48 | 2.75 |
| CDY07850 | Canola | cytosol, plastid | 3.72 | 2.7 |
| CDY15444 | Canola | cytosol, mitochondrion | 2.07 | 2.38 |
| CDX97273 | Canola | cytosol, mitochondrion | 2.07 | 2.35 |
| CDY18015 | Canola | cytosol | 2.07 | 2.35 |
| CDY50375 | Canola | cytosol, mitochondrion | 2.07 | 2.35 |
| CDY65569 | Canola | cytosol, mitochondrion | 2.07 | 2.35 |
| CDX90933 | Canola | cytosol | 2.07 | 2.35 |
| PGSC0003DMT400029561 | Potato | cytosol | 2.07 | 2.34 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 2.07 | 2.34 |
| CDY71513 | Canola | plastid | 2.48 | 2.27 |
| CDY53015 | Canola | cytosol | 1.65 | 2.0 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 1.65 | 1.9 |
| CDX89931 | Canola | cytosol, mitochondrion | 1.65 | 1.9 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 1.65 | 1.9 |
| CDY18131 | Canola | cytosol, mitochondrion | 1.65 | 1.9 |
| CDY22058 | Canola | cytosol, mitochondrion | 1.65 | 1.88 |
| CDY50374 | Canola | cytosol, mitochondrion | 1.65 | 1.88 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 1.65 | 1.83 |
| CDX93963 | Canola | cytosol | 1.65 | 1.83 |
| CDY02726 | Canola | cytosol | 1.24 | 1.4 |
| CDX97788 | Canola | cytosol | 1.24 | 1.4 |
| CDX84816 | Canola | cytosol | 1.24 | 1.4 |
| CDX85469 | Canola | cytosol, mitochondrion | 1.24 | 1.4 |
| CDY29636 | Canola | cytosol | 1.24 | 1.4 |
| CDY23980 | Canola | cytosol | 1.24 | 1.4 |
| CDX80129 | Canola | cytosol | 1.24 | 1.39 |
| CDY16947 | Canola | cytosol | 0.83 | 0.94 |
| CDX69395 | Canola | cytosol | 0.83 | 0.94 |
| CDY23979 | Canola | endoplasmic reticulum | 0.83 | 0.93 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 0.83 | 0.93 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 1.24 | 0.88 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EnsemblPlants:CDX89928 | ProteinID:CDX89928 | ProteinID:CDX89928.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00150412001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | InterPro:Thioredoxin-like_sf | UniParc:UPI0004EEA71D | : | : | : |
Description
BnaA10g01540D
Coordinates
chrLK031861:+:813380..814604
Molecular Weight (calculated)
27759.6 Da
IEP (calculated)
10.053
GRAVY (calculated)
-0.338
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKLSVTL ALMIVIMSIS YEAYALAHKD GYKIYGYPSS PNTRSALAVL HEKGLSFDRI TVNLTTGDQQ KPSFLPINPF GQVPVFLDGH LKHLFSLESR
101: AISLYIETVH RSRGTKLLNH KNYKKMGTET MWMYVESFEF DPPASILGLK ADYKVVNETE TNLGKVLDVY EERLKNSRFL ASNRFTLADL FHLPNIEYLM
201: NTTTKRLFET RPNVHRWVAK ITARPAWKKA CDAKAWYDKK KN
101: AISLYIETVH RSRGTKLLNH KNYKKMGTET MWMYVESFEF DPPASILGLK ADYKVVNETE TNLGKVLDVY EERLKNSRFL ASNRFTLADL FHLPNIEYLM
201: NTTTKRLFET RPNVHRWVAK ITARPAWKKA CDAKAWYDKK KN
001: MGSSILLVLF TLMVMLSISY EPLKWMGINA SHVPETCYHH CNQTFESSRQ CFKWCQELAR KDEYKIYGYP YSTNTRRVLA VLHEKGLSYD PITVNLIAGD
101: QKKPSFLAIN PFGQVPVFLD GGLKLTESRA ISEYIATVHK SRGTQLLNYK SYKTMGTQRM WMAIESFEFD PLTSTLTWEQ SIKPMYGLKT DYKVVNETEA
201: KLEKVLDIYE ERLKNSSFLA SNSFTMADLY HLPNIQYLMD THTKRMFVNR PSVRRWVAEI TARPAWKRAC DVKAWYHKKK N
101: QKKPSFLAIN PFGQVPVFLD GGLKLTESRA ISEYIATVHK SRGTQLLNYK SYKTMGTQRM WMAIESFEFD PLTSTLTWEQ SIKPMYGLKT DYKVVNETEA
201: KLEKVLDIYE ERLKNSSFLA SNSFTMADLY HLPNIQYLMD THTKRMFVNR PSVRRWVAEI TARPAWKRAC DVKAWYHKKK N
Arabidopsis Description
ATGSTF5glutathione S-transferase (class phi) 5 [Source:TAIR;Acc:AT1G02940]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.