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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023602.1-P Field mustard endoplasmic reticulum, extracellular 99.53 99.53
CDY02726 Canola cytosol 94.42 94.86
CDX69395 Canola cytosol 89.77 90.61
CDY16947 Canola cytosol 89.3 90.14
AT5G17220.1 Thale cress cytosol 84.65 85.05
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 66.98 68.57
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 66.05 67.62
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 95.81 60.23
VIT_04s0079g00690.t01 Wine grape mitochondrion 56.74 57.28
KRH30892 Soybean cytosol 56.28 56.81
KRG97999 Soybean cytosol 54.88 55.4
VIT_04s0079g00710.t01 Wine grape cytosol 53.02 53.52
GSMUA_Achr4P11730_001 Banana cytosol 51.16 49.77
CDX90933 Canola cytosol 45.12 45.54
CDY18015 Canola cytosol 44.65 45.07
CDY22058 Canola cytosol, mitochondrion 44.19 44.6
CDX90934 Canola cytosol, mitochondrion 44.19 44.6
CDY18016 Canola cytosol, mitochondrion 43.72 44.13
Solyc02g081340.2.1 Tomato cytosol, endoplasmic reticulum 46.98 43.91
CDY50374 Canola cytosol, mitochondrion 43.26 43.66
PGSC0003DMT400043105 Potato cytosol, endoplasmic reticulum 46.51 43.48
CDX93963 Canola cytosol 44.19 43.38
CDY53015 Canola cytosol 40.0 43.0
CDX97788 Canola cytosol 42.79 42.79
CDY29636 Canola cytosol 42.79 42.79
CDX97273 Canola cytosol, mitochondrion 42.33 42.72
CDY65569 Canola cytosol, mitochondrion 42.33 42.72
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 43.26 42.47
CDX84816 Canola cytosol 42.33 42.33
CDY23980 Canola cytosol 42.33 42.33
CDX84815 Canola cytosol, endoplasmic reticulum 40.93 40.93
CDY23979 Canola endoplasmic reticulum 40.93 40.93
CDY50375 Canola cytosol, mitochondrion 40.0 40.38
CDX80129 Canola cytosol 40.47 40.28
CDX95731 Canola cytosol 40.0 40.0
CDY15444 Canola cytosol, mitochondrion 39.07 40.0
CDY18131 Canola cytosol, mitochondrion 38.6 39.52
CDX89931 Canola cytosol, mitochondrion 38.6 39.52
CDX89927 Canola cytosol 41.86 35.57
CDY07846 Canola cytosol 35.81 35.32
CDY37204 Canola cytosol 40.93 34.65
CDY37454 Canola cytosol, mitochondrion 40.0 34.26
CDY32486 Canola cytosol, mitochondrion 39.53 33.86
CDY71513 Canola plastid 39.53 32.2
CDY18136 Canola cytosol 41.4 26.73
CDY07850 Canola cytosol, plastid 39.07 25.23
GSMUA_Achr4P04940_001 Banana cytosol 46.98 22.15
CDX89928 Canola endoplasmic reticulum 1.4 1.24
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10EnsemblPlants:CDX85469ProteinID:CDX85469ProteinID:CDX85469.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00143167001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF18SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EE52B2:::::
Description
BnaA02g03440D
Coordinates
chrLK031842:-:242446..243327
Molecular Weight (calculated)
24752.2 Da
IEP (calculated)
6.039
GRAVY (calculated)
-0.116
Length
215 amino acids
Sequence
(BLAST)
001: MVVKLYGQVT AACPQRVLLC FLEKEIEFEI VHVDLDTLEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKYSN QGTNLLGKSL EHRAIVDQWA
101: DVETHYFNVL AFPIVLNLVI KPRLGEECDA VLVEELKAKL GVVLDIYENR LASNRFLAGD EFTMADLTHM PAMGYLMRTD VNQMVKARVN MNRWWEELTA
201: RPAWKKLMKM AGFEA
Best Arabidopsis Sequence Match ( AT5G17220.1 )
(BLAST)
001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH
Arabidopsis Description
GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.