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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 98.1 98.1
Bra032010.1-P Field mustard cytosol, endoplasmic reticulum, mitochondrion, plastid 97.14 97.14
AT3G03190.1 Thale cress cytosol 81.9 80.37
CDX69395 Canola cytosol 69.05 68.08
CDY16947 Canola cytosol 68.1 67.14
CDX85469 Canola cytosol, mitochondrion 67.62 66.05
CDY02726 Canola cytosol 64.29 63.08
KRH30892 Soybean cytosol 58.1 57.28
KRG97999 Soybean cytosol 57.62 56.81
VIT_04s0079g00690.t01 Wine grape mitochondrion 57.14 56.34
VIT_04s0079g00710.t01 Wine grape cytosol 51.43 50.7
GSMUA_Achr4P11730_001 Banana cytosol 50.95 48.42
CDX97788 Canola cytosol 47.14 46.05
CDY29636 Canola cytosol 47.14 46.05
CDX84815 Canola cytosol, endoplasmic reticulum 46.67 45.58
CDX84816 Canola cytosol 46.67 45.58
CDY23980 Canola cytosol 46.67 45.58
CDY23979 Canola endoplasmic reticulum 46.67 45.58
CDX90933 Canola cytosol 45.71 45.07
CDY18015 Canola cytosol 45.24 44.6
Solyc02g081340.2.1 Tomato cytosol, endoplasmic reticulum 48.57 44.35
PGSC0003DMT400043105 Potato cytosol, endoplasmic reticulum 48.1 43.91
CDX90934 Canola cytosol, mitochondrion 43.33 42.72
CDY22058 Canola cytosol, mitochondrion 43.33 42.72
CDY18016 Canola cytosol, mitochondrion 42.86 42.25
CDX97273 Canola cytosol, mitochondrion 42.86 42.25
CDY65569 Canola cytosol, mitochondrion 42.86 42.25
CDY50374 Canola cytosol, mitochondrion 42.86 42.25
CDX93963 Canola cytosol 43.81 42.01
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.38 40.64
CDY15444 Canola cytosol, mitochondrion 40.48 40.48
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 65.71 40.35
CDY18131 Canola cytosol, mitochondrion 40.0 40.0
CDY50375 Canola cytosol, mitochondrion 40.48 39.91
CDX89931 Canola cytosol, mitochondrion 39.52 39.52
CDY53015 Canola cytosol 37.14 39.0
CDX80129 Canola cytosol 37.62 36.57
CDX95731 Canola cytosol 37.14 36.28
CDX89927 Canola cytosol 40.48 33.6
CDY07846 Canola cytosol 34.76 33.49
CDY37204 Canola cytosol 40.48 33.46
CDY37454 Canola cytosol, mitochondrion 37.14 31.08
CDY32486 Canola cytosol, mitochondrion 36.67 30.68
CDY71513 Canola plastid 37.14 29.55
CDY18136 Canola cytosol 40.0 25.23
CDY07850 Canola cytosol, plastid 38.57 24.32
GSMUA_Achr4P04940_001 Banana cytosol 48.1 22.15
CDX89928 Canola endoplasmic reticulum 1.9 1.65
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10UniProt:A0A078GU85EnsemblPlants:CDY28744ProteinID:CDY28744ProteinID:CDY28744.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00041384001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798
PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF18SUPFAM:SSF47616SUPFAM:SSF52833
InterPro:Thioredoxin-like_sfUniParc:UPI0004EEC029SEG:seg:::
Description
BnaCnng06300DBnaCnng06300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GU85]
Coordinates
chrLK032225:+:510310..511399
Molecular Weight (calculated)
24232.4 Da
IEP (calculated)
4.749
GRAVY (calculated)
-0.110
Length
210 amino acids
Sequence
(BLAST)
001: MVVKLFGQIK AGNPQRVLLC FLEKGIEFEV IHVDLNTFEQ KKPEYLLRQP FGQVPAIEDE DLKLFESRAI SRYYATKYAD QGTDLLGKTL EQRAIVEEWM
101: EVEANYFNVV VLPLVINIVF TPKFDVALVE ELKVKLDKVL DVYENQLATN RYLAGAEFSL ADLTHMPGMR YIMNEAGLGS MVTSRENVNR WWNEISARPA
201: WKQLMEMAAY
Best Arabidopsis Sequence Match ( AT3G03190.1 )
(BLAST)
001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY
Arabidopsis Description
GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.