Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G49860.1 | CDY04768 | AT1G22920.1 | 21798944 |
| AT1G49860.1 | CDY21400 | AT1G22920.1 | 21798944 |
| AT1G49860.1 | CDY25761 | AT1G22920.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037204.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| AT1G49860.1 | Thale cress | cytosol | 75.2 | 75.2 |
| CDY15444 | Canola | cytosol, mitochondrion | 39.37 | 47.62 |
| CDX93963 | Canola | cytosol | 40.94 | 47.49 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.94 | 47.49 |
| CDY22058 | Canola | cytosol, mitochondrion | 39.76 | 47.42 |
| CDX90934 | Canola | cytosol, mitochondrion | 39.76 | 47.42 |
| CDX89931 | Canola | cytosol, mitochondrion | 38.98 | 47.14 |
| CDY18131 | Canola | cytosol, mitochondrion | 38.98 | 47.14 |
| CDY53015 | Canola | cytosol | 37.01 | 47.0 |
| CDY18016 | Canola | cytosol, mitochondrion | 39.37 | 46.95 |
| CDY50374 | Canola | cytosol, mitochondrion | 39.37 | 46.95 |
| CDX97273 | Canola | cytosol, mitochondrion | 38.98 | 46.48 |
| CDY65569 | Canola | cytosol, mitochondrion | 38.98 | 46.48 |
| CDY50375 | Canola | cytosol, mitochondrion | 38.58 | 46.01 |
| CDY18015 | Canola | cytosol | 38.58 | 46.01 |
| CDX90933 | Canola | cytosol | 38.19 | 45.54 |
| CDX95731 | Canola | cytosol | 38.19 | 45.12 |
| CDX80129 | Canola | cytosol | 37.4 | 43.98 |
| CDY07846 | Canola | cytosol | 35.83 | 41.74 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 34.25 | 41.43 |
| CDX85469 | Canola | cytosol, mitochondrion | 34.65 | 40.93 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.46 | 40.48 |
| CDY16947 | Canola | cytosol | 33.46 | 39.91 |
| CDX69395 | Canola | cytosol | 33.46 | 39.91 |
| CDX89927 | Canola | cytosol | 39.37 | 39.53 |
| CDY02726 | Canola | cytosol | 33.07 | 39.25 |
| CDY37454 | Canola | cytosol, mitochondrion | 37.4 | 37.85 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 31.89 | 37.67 |
| CDY32486 | Canola | cytosol, mitochondrion | 37.01 | 37.45 |
| CDX84816 | Canola | cytosol | 31.5 | 37.21 |
| CDY23979 | Canola | endoplasmic reticulum | 31.5 | 37.21 |
| CDY23980 | Canola | cytosol | 31.5 | 37.21 |
| CDY29636 | Canola | cytosol | 31.5 | 37.21 |
| CDX97788 | Canola | cytosol | 31.1 | 36.74 |
| CDY71513 | Canola | plastid | 38.19 | 36.74 |
| CDY18136 | Canola | cytosol | 38.98 | 29.73 |
| CDY07850 | Canola | cytosol, plastid | 37.4 | 28.53 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 33.86 | 25.15 |
| CDX89928 | Canola | endoplasmic reticulum | 2.76 | 2.89 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A078HIM0 | EnsemblPlants:CDY37204 | ProteinID:CDY37204 | ProteinID:CDY37204.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00063685001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0002541C23 | : | : | : | : |
Description
BnaA09g08250DBnaA09g08250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIM0]
Coordinates
chrLK032395:-:48314..50658
Molecular Weight (calculated)
29135.2 Da
IEP (calculated)
4.935
GRAVY (calculated)
-0.272
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQKMKLHC GFIFSNWTAM FGLHEKSLDF ELVFVDWVAG EARTKTFLSN LNPFGQVPVL EDGDLKLFES KAITRYLAEQ YKDVGTDLLP NDAKERAIVS
101: MWMEIDTNQF LPLASTLIRE LVTKPYQGLA TDFTSVQENK EKLSEVLNIY EARLGESCYL AGESFTLADL HHLPPIHYML KMEEEGVKDL IYSRPNVTAW
201: VEKMQSRPAW LKTVVKGDHI FELMKQRRMP MQLDSPCQEV TGLAQKTAMV TENT
101: MWMEIDTNQF LPLASTLIRE LVTKPYQGLA TDFTSVQENK EKLSEVLNIY EARLGESCYL AGESFTLADL HHLPPIHYML KMEEEGVKDL IYSRPNVTAW
201: VEKMQSRPAW LKTVVKGDHI FELMKQRRMP MQLDSPCQEV TGLAQKTAMV TENT
001: MADSKMKLHC GFIWGNSAAL FCINEKGLDF ELVFVDWLAG EAKTKTFLST LNPFGEVPVL EDGDLKLFEP KAITRYLAEQ YKDVGTNLLP DDPKKRAIMS
101: MWMEVDSNQF LPIASTLIKE LIINPYQGLA TDDTAVQENK EKLSEVLNIY ETRLGESPYL AGESFSLADL HHLAPIDYLL NTDEEELKNL IYSRPNVAAW
201: VEKMKMRPAW LKTVVMKNHI VDLMKQRRLP IKLDSSCHES TVVAQKNAIA IENK
101: MWMEVDSNQF LPIASTLIKE LIINPYQGLA TDDTAVQENK EKLSEVLNIY ETRLGESPYL AGESFSLADL HHLAPIDYLL NTDEEELKNL IYSRPNVAAW
201: VEKMKMRPAW LKTVVMKNHI VDLMKQRRLP IKLDSSCHES TVVAQKNAIA IENK
Arabidopsis Description
GSTF14Glutathione S-transferase F14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6C8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.