CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07846	Canola	cytosol	49.25	75.23
AT1G02950.5	Thale cress	cytosol	57.36	74.9
CDX89927	Canola	cytosol	56.46	74.31
CDY37454	Canola	cytosol, mitochondrion	53.75	71.31
CDY32486	Canola	cytosol, mitochondrion	53.45	70.92
CDY15444	Canola	cytosol, mitochondrion	37.24	59.05
CDX89931	Canola	cytosol, mitochondrion	36.94	58.57
CDY18131	Canola	cytosol, mitochondrion	36.94	58.57
CDY50374	Canola	cytosol, mitochondrion	36.64	57.28
CDY65569	Canola	cytosol, mitochondrion	36.64	57.28
CDX97273	Canola	cytosol, mitochondrion	36.64	57.28
CDX90934	Canola	cytosol, mitochondrion	36.34	56.81
CDY18016	Canola	cytosol, mitochondrion	36.34	56.81
CDY22058	Canola	cytosol, mitochondrion	36.04	56.34
CDY18136	Canola	cytosol	56.16	56.16
CDY50375	Canola	cytosol, mitochondrion	35.74	55.87
VIT_07s0005g00010.t01	Wine grape	cytosol	34.83	54.21
CDX90933	Canola	cytosol	34.53	53.99
CDY18015	Canola	cytosol	34.23	53.52
VIT_07s0005g00030.t01	Wine grape	cytosol	33.63	52.34
Solyc09g074850.2.1	Tomato	cytosol	30.93	51.5
CDY53015	Canola	cytosol	30.63	51.0
PGSC0003DMT400029561	Potato	cytosol	32.43	50.47
Solyc06g009020.2.1	Tomato	plastid	32.13	50.23
PGSC0003DMT400037918	Potato	cytosol	32.13	50.23
CDX95731	Canola	cytosol	32.43	50.23
CDX80129	Canola	cytosol	32.43	50.0
Solyc06g009040.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.63	48.11
CDY71513	Canola	plastid	33.93	42.8
CDX85469	Canola	cytosol, mitochondrion	25.23	39.07
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	24.62	39.05
CDX69395	Canola	cytosol	24.92	38.97
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	25.53	38.81
CDX93963	Canola	cytosol	25.53	38.81
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	24.32	38.57
CDY16947	Canola	cytosol	24.62	38.5
CDY02726	Canola	cytosol	24.62	38.32
CDY37204	Canola	cytosol	28.53	37.4
CDY29636	Canola	cytosol	23.72	36.74
CDX97788	Canola	cytosol	23.72	36.74
CDX84816	Canola	cytosol	23.12	35.81
CDY23980	Canola	cytosol	23.12	35.81
CDX84815	Canola	cytosol, endoplasmic reticulum	21.92	33.95
CDY23979	Canola	endoplasmic reticulum	21.62	33.49
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	25.23	24.56
CDX89928	Canola	endoplasmic reticulum	2.7	3.72
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A078F0A5	EnsemblPlants:CDY07850	ProteinID:CDY07850	ProteinID:CDY07850.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00125011001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF7	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0004EF0B60	:	:	:	:

Description

BnaC03g47720DBnaC03g47720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F0A5]

Coordinates

chrLK031981:+:489857..500452

Molecular Weight (calculated)

38489.1 Da

IEP (calculated)

6.188

GRAVY (calculated)

-0.291

Length

333 amino acids

Sequence
(BLAST)

001: MLSVPSPNYA FLTSISSVNI SHKCVREQMM IRRFNTTPKQ ALHHSLSSCI ILYEYIYSKE DNETGCHFIP HVTDCGFAVI MEDDERFETL ETIVRRRYCV
101: EESTLMVITY GIPDWMLSLK GYKVHGDPFS TNTRRVLAVL LEKGISYEPI TVDLKTGEHK RESYLSLNPF GQVPVFEDGN IKLCESRAIT QYIAYVHSSR
201: GTQLLNLQSH KTMATLTMWM EFEAHQFDPF ASVLTWEQVI KPIYGLETDQ TVVEENETGL ENVLNVYEKR LQESRFLACN TFTLVDLHHL PNIQYLLGTP
301: TKKLFENRPK VRTWVDDITG REAWKLACDH DKS

Best Arabidopsis Sequence Match ( AT1G02950.5 )
(BLAST)

001: MQKLNKCIYI VYMDCLQMVF KLFPNWKREA EVKKLGYKVH GDPFSTNTRR VLAVLHEKRL SYEPITVKLQ TGEHKTEPFL SLNPFGQVPV FEDGSVKLYE
101: SRAITQYIAY VHSSRGTQLL NLRSHETMAT LTMWMEIEAH QFDPPASKLT WEQVIKPIYG LETDQTIVKE NEAILEKVLN IYEKRLEESR FLACNSFTLV
201: DLHHLPNIQY LLGTPTKKLF EKRSKVRKWV DEITSREAWK MACDQEKSWF NKPRN

Arabidopsis Description

ATGSTF4glutathione S-transferase F4 [Source:TAIR;Acc:AT1G02950]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.