Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024517.1-P | Field mustard | cytosol | 65.14 | 79.78 |
| CDX89927 | Canola | cytosol | 78.9 | 67.98 |
| CDY37454 | Canola | cytosol, mitochondrion | 77.06 | 66.93 |
| AT1G02950.5 | Thale cress | cytosol | 77.98 | 66.67 |
| CDY32486 | Canola | cytosol, mitochondrion | 76.15 | 66.14 |
| CDY15444 | Canola | cytosol, mitochondrion | 53.67 | 55.71 |
| CDY18131 | Canola | cytosol, mitochondrion | 53.21 | 55.24 |
| CDX89931 | Canola | cytosol, mitochondrion | 53.21 | 55.24 |
| CDX90934 | Canola | cytosol, mitochondrion | 52.75 | 53.99 |
| CDY18016 | Canola | cytosol, mitochondrion | 52.29 | 53.52 |
| CDY50374 | Canola | cytosol, mitochondrion | 51.83 | 53.05 |
| CDY65569 | Canola | cytosol, mitochondrion | 51.38 | 52.58 |
| CDX97273 | Canola | cytosol, mitochondrion | 51.38 | 52.58 |
| CDY22058 | Canola | cytosol, mitochondrion | 50.92 | 52.11 |
| CDY50375 | Canola | cytosol, mitochondrion | 50.46 | 51.64 |
| CDY18136 | Canola | cytosol | 78.44 | 51.35 |
| CDX90933 | Canola | cytosol | 49.08 | 50.23 |
| CDY18015 | Canola | cytosol | 48.62 | 49.77 |
| CDY07850 | Canola | cytosol, plastid | 75.23 | 49.25 |
| VIT_07s0005g00010.t01 | Wine grape | cytosol | 46.33 | 47.2 |
| Solyc09g074850.2.1 | Tomato | cytosol | 43.12 | 47.0 |
| PGSC0003DMT400029561 | Potato | cytosol | 45.41 | 46.26 |
| PGSC0003DMT400037918 | Potato | cytosol | 44.5 | 45.54 |
| VIT_07s0005g00030.t01 | Wine grape | cytosol | 44.5 | 45.33 |
| Solyc06g009020.2.1 | Tomato | plastid | 44.04 | 45.07 |
| CDY53015 | Canola | cytosol | 41.28 | 45.0 |
| CDX95731 | Canola | cytosol | 44.04 | 44.65 |
| CDX80129 | Canola | cytosol | 44.04 | 44.44 |
| Solyc06g009040.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 42.66 | 43.87 |
| CDY71513 | Canola | plastid | 45.87 | 37.88 |
| CDX93963 | Canola | cytosol | 37.61 | 37.44 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 36.7 | 36.53 |
| CDY37204 | Canola | cytosol | 41.74 | 35.83 |
| CDX85469 | Canola | cytosol, mitochondrion | 35.32 | 35.81 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.49 | 34.76 |
| CDX69395 | Canola | cytosol | 33.95 | 34.74 |
| CDY02726 | Canola | cytosol | 33.95 | 34.58 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 33.03 | 34.29 |
| CDY16947 | Canola | cytosol | 33.49 | 34.27 |
| CDX97788 | Canola | cytosol | 31.19 | 31.63 |
| CDY29636 | Canola | cytosol | 31.19 | 31.63 |
| CDY23980 | Canola | cytosol | 30.73 | 31.16 |
| CDX84816 | Canola | cytosol | 30.73 | 31.16 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 30.28 | 30.7 |
| CDY23979 | Canola | endoplasmic reticulum | 29.82 | 30.23 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 34.4 | 21.93 |
| CDX89928 | Canola | endoplasmic reticulum | 2.75 | 2.48 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A078F383 | EnsemblPlants:CDY07846 | ProteinID:CDY07846 | ProteinID:CDY07846.1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00125005001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like |
| InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 |
| PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF7 | SUPFAM:SSF47616 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin-like_sf | UniParc:UPI0004EE4807 | SEG:seg | : | : | : |
Description
BnaC03g47760DBnaC03g47760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F383]
Coordinates
chrLK031981:+:469098..470316
Molecular Weight (calculated)
25232.3 Da
IEP (calculated)
6.098
GRAVY (calculated)
-0.321
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYRRLVSKL MPSWKREAEV KMLEGYKIHG HPFSTNTRRV LAVLLEKGLL YEPITVDLKS GEHKSESFLS LNPFGQVPVF EDENVKLFES RAITQYIAYL
101: HSARGTQLLS LESEETLATL TMWMEIEAHQ FDPFASRLTW EQVIKPLYGL ETDHTVVKEN EAGLEQVLNV YEKRLGESRF LACNTFTLVD LHHLPNIQYL
201: FETPTKTLLE NRPRYVGG
101: HSARGTQLLS LESEETLATL TMWMEIEAHQ FDPFASRLTW EQVIKPLYGL ETDHTVVKEN EAGLEQVLNV YEKRLGESRF LACNTFTLVD LHHLPNIQYL
201: FETPTKTLLE NRPRYVGG
001: MGINASHVPE TCYHHCNQTF ESSRQCFKWC QELARKDEYK IYGYPYSTNT RRVLAVLHEK GLSYDPITVN LIAGDQKKPS FLAINPFGQV PVFLDGGLKL
101: TESRAISEYI ATVHKSRGTQ LLNYKSYKTM GTQRMWMAIE SFEFDPLTST LTWEQSIKPM YGLKTDYKVV NETEAKLEKV LDIYEERLKN SSFLASNSFT
201: MADLYHLPNI QYLMDTHTKR MFVNRPSVRR WVAEITARPA WKRACDVKAW YHKKKN
101: TESRAISEYI ATVHKSRGTQ LLNYKSYKTM GTQRMWMAIE SFEFDPLTST LTWEQSIKPM YGLKTDYKVV NETEAKLEKV LDIYEERLKN SSFLASNSFT
201: MADLYHLPNI QYLMDTHTKR MFVNRPSVRR WVAEITARPA WKRACDVKAW YHKKKN
Arabidopsis Description
ATGSTF5glutathione S-transferase (class phi) 5 [Source:TAIR;Acc:AT1G02940]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.