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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18016 Canola cytosol, mitochondrion 98.59 98.59
Bra000876.1-P Field mustard cytosol, mitochondrion 98.59 98.59
AT4G02520.1 Thale cress cytosol, mitochondrion 85.92 86.32
AT2G02930.1 Thale cress cytosol, mitochondrion 85.92 86.32
CDY65569 Canola cytosol, mitochondrion 85.92 85.92
CDX90933 Canola cytosol 85.92 85.92
CDY50374 Canola cytosol, mitochondrion 85.45 85.45
CDX97273 Canola cytosol, mitochondrion 85.45 85.45
CDY22058 Canola cytosol, mitochondrion 84.98 84.98
CDY50375 Canola cytosol, mitochondrion 84.51 84.51
CDY18015 Canola cytosol 84.04 84.04
CDY15444 Canola cytosol, mitochondrion 74.65 75.71
CDY18131 Canola cytosol, mitochondrion 74.18 75.24
CDX89931 Canola cytosol, mitochondrion 73.24 74.29
Solyc06g009040.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 59.15 59.43
PGSC0003DMT400037918 Potato cytosol 59.15 59.15
VIT_07s0005g00010.t01 Wine grape cytosol 59.15 58.88
Solyc06g009020.2.1 Tomato plastid 58.69 58.69
VIT_07s0005g00030.t01 Wine grape cytosol 57.28 57.01
PGSC0003DMT400029561 Potato cytosol 56.34 56.07
CDY53015 Canola cytosol 52.11 55.5
CDX80129 Canola cytosol 55.87 55.09
Solyc09g074850.2.1 Tomato cytosol 51.64 55.0
CDY07846 Canola cytosol 53.99 52.75
CDX95731 Canola cytosol 53.05 52.56
CDY37454 Canola cytosol, mitochondrion 58.69 49.8
CDY32486 Canola cytosol, mitochondrion 58.22 49.4
CDX89927 Canola cytosol 58.22 49.01
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 46.95 45.66
CDX93963 Canola cytosol 46.48 45.21
CDY43144 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 43.66 44.29
CDX85469 Canola cytosol, mitochondrion 44.6 44.19
CDY28744 Canola cytosol, endoplasmic reticulum, mitochondrion, plastid 42.72 43.33
CDY16947 Canola cytosol 43.19 43.19
CDY02726 Canola cytosol 43.19 42.99
CDY71513 Canola plastid 53.05 42.8
CDX69395 Canola cytosol 42.72 42.72
CDX97788 Canola cytosol 41.31 40.93
CDY29636 Canola cytosol 40.85 40.47
CDY23980 Canola cytosol 40.38 40.0
CDX84816 Canola cytosol 40.38 40.0
CDY37204 Canola cytosol 47.42 39.76
CDY18136 Canola cytosol 57.75 36.94
CDX84815 Canola cytosol, endoplasmic reticulum 37.09 36.74
CDY07850 Canola cytosol, plastid 56.81 36.34
CDY23979 Canola endoplasmic reticulum 36.62 36.28
CDY02724 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 43.66 27.19
CDX89928 Canola endoplasmic reticulum 2.82 2.48
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10EnsemblPlants:CDX90934ProteinID:CDX90934ProteinID:CDX90934.1GO:GO:0003674GO:GO:0005488
GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00151674001InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_NInterPro:IPR004045InterPro:IPR010987PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF7SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI0004EE94B8SEG:seg::::
Description
BnaA03g26140D
Coordinates
chrLK031864:+:1425027..1426341
Molecular Weight (calculated)
24255.2 Da
IEP (calculated)
7.147
GRAVY (calculated)
-0.285
Length
213 amino acids
Sequence
(BLAST)
001: MAGIKVFGHA ASISTRRVLL TLHEKNLDFE LVHVDLKDGE HKKESFLSHN PFGKVPAFED GDLKLFESRA ITQYIAHRYE GQGTNLLQPD SKNLAQYAIM
101: AMGMQVEAHQ FDPLASKLAW EHVFKLIYGL TTDQAVVAEE EAKLAKVLDV YEARLKEFKY LAGDTFTLTD LHHIPAVQYL LETPTKRLFT ERPHVNKWVA
201: EITKRPASQK ILQ
Best Arabidopsis Sequence Match ( AT4G02520.1 )
(BLAST)
001: MAGIKVFGHP ASIATRRVLI ALHEKNLDFE LVHVELKDGE HKKEPFLSRN PFGQVPAFED GDLKLFESRA ITQYIAHRYE NQGTNLLQTD SKNISQYAIM
101: AIGMQVEDHQ FDPVASKLAF EQIFKSIYGL TTDEAVVAEE EAKLAKVLDV YEARLKEFKY LAGETFTLTD LHHIPAIQYL LGTPTKKLFT ERPRVNEWVA
201: EITKRPASEK VQ
Arabidopsis Description
GSTF2Glutathione S-transferase F2 [Source:UniProtKB/Swiss-Prot;Acc:P46422]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.