Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85469 | Canola | cytosol, mitochondrion | 94.86 | 94.42 |
| CDX69395 | Canola | cytosol | 85.05 | 85.45 |
| CDY16947 | Canola | cytosol | 84.58 | 84.98 |
| AT5G17220.1 | Thale cress | cytosol | 81.31 | 81.31 |
| CDY43144 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 64.02 | 65.24 |
| CDY28744 | Canola | cytosol, endoplasmic reticulum, mitochondrion, plastid | 63.08 | 64.29 |
| CDY02724 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 98.13 | 61.4 |
| VIT_04s0079g00690.t01 | Wine grape | mitochondrion | 54.21 | 54.46 |
| KRH30892 | Soybean | cytosol | 53.27 | 53.52 |
| KRG97999 | Soybean | cytosol | 51.87 | 52.11 |
| VIT_04s0079g00710.t01 | Wine grape | cytosol | 50.0 | 50.23 |
| GSMUA_Achr4P11730_001 | Banana | cytosol | 48.6 | 47.06 |
| CDY18015 | Canola | cytosol | 44.39 | 44.6 |
| CDX90933 | Canola | cytosol | 43.93 | 44.13 |
| CDX90934 | Canola | cytosol, mitochondrion | 42.99 | 43.19 |
| CDY53015 | Canola | cytosol | 40.19 | 43.0 |
| CDY18016 | Canola | cytosol, mitochondrion | 42.52 | 42.72 |
| CDY22058 | Canola | cytosol, mitochondrion | 42.52 | 42.72 |
| CDY50374 | Canola | cytosol, mitochondrion | 41.59 | 41.78 |
| CDX97273 | Canola | cytosol, mitochondrion | 41.12 | 41.31 |
| CDY65569 | Canola | cytosol, mitochondrion | 41.12 | 41.31 |
| Solyc02g081340.2.1 | Tomato | cytosol, endoplasmic reticulum | 44.39 | 41.3 |
| PGSC0003DMT400043105 | Potato | cytosol, endoplasmic reticulum | 43.93 | 40.87 |
| CDX97788 | Canola | cytosol | 40.19 | 40.0 |
| CDX84815 | Canola | cytosol, endoplasmic reticulum | 40.19 | 40.0 |
| CDY23979 | Canola | endoplasmic reticulum | 40.19 | 40.0 |
| CDY29636 | Canola | cytosol | 40.19 | 40.0 |
| CDX84816 | Canola | cytosol | 39.72 | 39.53 |
| CDY23980 | Canola | cytosol | 39.72 | 39.53 |
| CDX80129 | Canola | cytosol | 39.72 | 39.35 |
| CDX93963 | Canola | cytosol | 40.19 | 39.27 |
| CDY50375 | Canola | cytosol, mitochondrion | 38.78 | 38.97 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.72 | 38.81 |
| CDX95731 | Canola | cytosol | 38.78 | 38.6 |
| CDY15444 | Canola | cytosol, mitochondrion | 37.85 | 38.57 |
| CDX89931 | Canola | cytosol, mitochondrion | 37.38 | 38.1 |
| CDY18131 | Canola | cytosol, mitochondrion | 37.38 | 38.1 |
| CDX89927 | Canola | cytosol | 40.19 | 33.99 |
| CDY07846 | Canola | cytosol | 34.58 | 33.95 |
| CDY37454 | Canola | cytosol, mitochondrion | 39.25 | 33.47 |
| CDY37204 | Canola | cytosol | 39.25 | 33.07 |
| CDY32486 | Canola | cytosol, mitochondrion | 38.78 | 33.07 |
| CDY71513 | Canola | plastid | 38.32 | 31.06 |
| CDY18136 | Canola | cytosol | 40.19 | 25.83 |
| CDY07850 | Canola | cytosol, plastid | 38.32 | 24.62 |
| GSMUA_Achr4P04940_001 | Banana | cytosol | 44.39 | 20.83 |
| CDX89928 | Canola | endoplasmic reticulum | 1.4 | 1.24 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EnsemblPlants:CDY02726 | ProteinID:CDY02726 | ProteinID:CDY02726.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00114880001 | InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf |
| InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF18 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0004EEE676 | : | : | : | : | : |
Description
BnaC02g07090D
Coordinates
chrLK031936:-:1087544..1090362
Molecular Weight (calculated)
24670.1 Da
IEP (calculated)
5.690
GRAVY (calculated)
-0.106
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MVDSLMRVTA ACPQRVVLCF LEKEIEFEIV HVDLDTLEQK KSEHLLRQPF GQVPAIEDGD FKLFESRAIA RYYATKYSNQ GTNLLGKSLE HRAIVDQWAD
101: VETHYFNVLA FPIVLNLVIK PRLGEECDVV LVEELKAKLG VVLDIYENRL ASNRFLAGDE FTMADLTHMP AMGYLMRTDV NQMVKARVNM NRWWEEITAR
201: PAWKKLMKMA GFEA
101: VETHYFNVLA FPIVLNLVIK PRLGEECDVV LVEELKAKLG VVLDIYENRL ASNRFLAGDE FTMADLTHMP AMGYLMRTDV NQMVKARVNM NRWWEEITAR
201: PAWKKLMKMA GFEA
001: MVVKLYGQVT AACPQRVLLC FLEKGIEFEI IHIDLDTFEQ KKPEHLLRQP FGQVPAIEDG DFKLFESRAI ARYYATKFAD QGTNLLGKSL EHRAIVDQWA
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH
101: DVETYYFNVL AQPLVINLII KPRLGEKCDV VLVEDLKVKL GVVLDIYNNR LSSNRFLAGE EFTMADLTHM PAMGYLMSIT DINQMVKARG SFNRWWEEIS
201: DRPSWKKLMV LAGH
Arabidopsis Description
GSTF12Glutathione S-transferase F12 [Source:UniProtKB/Swiss-Prot;Acc:Q9FE46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.