Factsheet for PGSC0003DMT400043105

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g081340.2.1	Tomato	cytosol, endoplasmic reticulum	96.09	96.09
VIT_04s0079g00690.t01	Wine grape	mitochondrion	58.26	62.91
KRH30892	Soybean	cytosol	56.96	61.5
KRG97999	Soybean	cytosol	56.52	61.03
VIT_04s0079g00710.t01	Wine grape	cytosol	55.65	60.09
GSMUA_Achr4P11730_001	Banana	cytosol	49.13	51.13
AT3G03190.1	Thale cress	cytosol	46.96	50.47
CDY43144	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.78	49.05
Bra032010.1-P	Field mustard	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.35	48.57
AT5G17220.1	Thale cress	cytosol	44.78	48.13
CDY28744	Canola	cytosol, endoplasmic reticulum, mitochondrion, plastid	43.91	48.1
CDX69395	Canola	cytosol	44.35	47.89
Bra008570.1-P	Field mustard	cytosol	44.35	47.89
CDY16947	Canola	cytosol	43.48	46.95
CDX85469	Canola	cytosol, mitochondrion	43.48	46.51
Bra023602.1-P	Field mustard	endoplasmic reticulum, extracellular	43.48	46.51
CDY02726	Canola	cytosol	40.87	43.93
PGSC0003DMT400075626	Potato	cytosol	40.0	41.63
PGSC0003DMT400037918	Potato	cytosol	36.96	39.91
PGSC0003DMT400029561	Potato	cytosol	36.09	38.78
CDY02724	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	41.74	28.07
GSMUA_Achr4P04940_001	Banana	cytosol	46.09	23.25

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:102589882
MapMan:18.8.1.5	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C
InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
UniProt:M1BE36	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400016722	PGSC:PGSC0003DMG400016722	EnsemblPlants:PGSC0003DMT400043105
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF18	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000296E67F	RefSeq:XP_006348185.1	:	:	:

Description

Glutathione S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400016722]

Coordinates

chr2:+:36961221..36962529

Molecular Weight (calculated)

26492.3 Da

IEP (calculated)

6.033

GRAVY (calculated)

-0.148

Length

230 amino acids

Sequence
(BLAST)

001: MVVKVYGSAM AACPQRVMVC LIELGVDYEL IHIDLDSLQQ KKPDFLILQP FGQVPVIEDG DFRLFESRAI IRYYAAKYED KGKKLTGTTL EEKALVDQWL
101: EVESNNYNDL VYNMVLQLLV FPKMGHNSDL IVVQKCANNL EKVFDIYEQR LSKSKYLAGD FFSLADLSHL PSLRFLMNEG GFAHLVTQRK CLHDWYLDIS
201: SRPSWNKVLD FMNMKKSEML PGPPKDEVKV

Best Arabidopsis Sequence Match ( AT3G03190.1 )
(BLAST)

001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY

Arabidopsis Description

GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.