Factsheet for PGSC0003DMT400075626

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

cytosol: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g094430.1.1	Tomato	plastid	97.74	97.74
VIT_18s0001g00690.t01	Wine grape	cytosol	77.38	76.68
GSMUA_Achr2P11180_001	Banana	cytosol	65.16	64.86
GSMUA_Achr5P17880_001	Banana	cytosol	64.71	64.71
Os03t0135300-01	Rice	plastid	60.18	59.38
EER92907	Sorghum	cytosol, plastid	59.28	58.48
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	58.82	57.52
TraesCS4D01G328000.1	Wheat	peroxisome	58.82	57.52
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	58.82	57.52
Zm00001d027542_P001	Maize	endoplasmic reticulum	59.73	55.23
HORVU4Hr1G081100.1	Barley	endoplasmic reticulum	59.73	52.38
PGSC0003DMT400037918	Potato	cytosol	42.53	44.13
PGSC0003DMT400029561	Potato	cytosol	42.08	43.46
PGSC0003DMT400043105	Potato	cytosol, endoplasmic reticulum	41.63	40.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	EntrezGene:102585121
MapMan:18.8.1.5	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C
InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
UniProt:M1CVI5	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400029416	PGSC:PGSC0003DMG400029416	EnsemblPlants:PGSC0003DMT400075626
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0002952386	RefSeq:XP_006342558.1	:	:	:	:

Description

Glutathione-s-transferase theta, gst [Source:PGSC_GENE;Acc:PGSC0003DMG400029416]

Coordinates

chr12:+:57239093..57241853

Molecular Weight (calculated)

25148.0 Da

IEP (calculated)

6.545

GRAVY (calculated)

-0.521

Length

221 amino acids

Sequence
(BLAST)

001: MATPVKVYGP TLSTAVSRVL ACLLEKNVQF QLIPVNMAKG EHKKPDYLKI QPFGQVPAYQ DEDITLFESR SINRYICDKY GSQGNKGLYG TNLLEKASID
101: QWIEAEGQSF NPPSSVLVFQ LAFAPRMKLK QDENLIRQNE EKLKKVLDVY EKRLGDSQYL AGDEFTLADL SHLPNIQYLV NGTDRAELFT SRENVGRWWG
201: DISNRESWKK VVEMQTSPPP S

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.