Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G502500.1 | Wheat | endoplasmic reticulum, peroxisome | 86.51 | 96.46 |
| TraesCS4D01G328000.1 | Wheat | peroxisome | 86.11 | 96.02 |
| TraesCS4B01G331100.1 | Wheat | endoplasmic reticulum, peroxisome | 86.11 | 96.02 |
| Os03t0135300-01 | Rice | plastid | 77.38 | 87.05 |
| EER92907 | Sorghum | cytosol, plastid | 75.4 | 84.82 |
| Zm00001d027542_P001 | Maize | endoplasmic reticulum | 73.81 | 77.82 |
| GSMUA_Achr2P11180_001 | Banana | cytosol | 56.35 | 63.96 |
| GSMUA_Achr5P17880_001 | Banana | cytosol | 54.76 | 62.44 |
| VIT_18s0001g00690.t01 | Wine grape | cytosol | 54.37 | 61.44 |
| Solyc12g094430.1.1 | Tomato | plastid | 52.78 | 60.18 |
| PGSC0003DMT400075626 | Potato | cytosol | 52.38 | 59.73 |
| HORVU4Hr1G081110.1 | Barley | cytosol | 41.67 | 47.09 |
| HORVU4Hr1G081150.1 | Barley | cytosol | 41.27 | 46.64 |
| HORVU3Hr1G097950.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 37.7 | 44.39 |
| HORVU1Hr1G052470.2 | Barley | cytosol | 40.48 | 39.23 |
| HORVU7Hr1G036850.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 34.92 | 39.11 |
| HORVU1Hr1G021140.1 | Barley | endoplasmic reticulum | 34.52 | 39.01 |
| HORVU1Hr1G002160.2 | Barley | cytosol | 32.54 | 38.14 |
| HORVU3Hr1G097900.3 | Barley | cytosol | 33.73 | 38.12 |
| HORVU1Hr1G021180.1 | Barley | cytosol | 35.32 | 37.87 |
| HORVU7Hr1G116650.3 | Barley | cytosol | 32.14 | 37.33 |
| HORVU1Hr1G021160.5 | Barley | cytosol | 32.94 | 35.93 |
| HORVU2Hr1G095460.1 | Barley | cytosol | 30.16 | 34.86 |
| HORVU1Hr1G021170.1 | Barley | cytosol | 31.75 | 34.63 |
| HORVU7Hr1G039140.3 | Barley | cytosol | 29.76 | 34.25 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 30.16 | 33.63 |
| HORVU3Hr1G074000.1 | Barley | cytosol | 28.97 | 33.49 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 34.13 | 32.58 |
| HORVU3Hr1G097870.1 | Barley | plastid | 33.73 | 32.08 |
| HORVU5Hr1G118800.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 28.17 | 31.98 |
| HORVU5Hr1G104670.2 | Barley | cytosol | 30.16 | 31.67 |
| HORVU3Hr1G117390.1 | Barley | cytosol | 30.16 | 29.8 |
| HORVU3Hr1G117370.1 | Barley | cytosol | 30.16 | 29.46 |
| HORVU3Hr1G074040.3 | Barley | cytosol, plasma membrane | 32.14 | 28.22 |
| HORVU5Hr1G006630.2 | Barley | cytosol | 25.0 | 27.39 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 41.67 | 26.58 |
| HORVU1Hr1G017050.1 | Barley | plastid | 23.41 | 26.34 |
| HORVU5Hr1G085070.43 | Barley | cytosol | 36.9 | 3.9 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A287PV69 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU4Hr1G081100 | EnsemblPlants:HORVU4Hr1G081100.1 |
| InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 |
| PANTHER:PTHR43900 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000B484C55 | : |
Description
No Description!
Coordinates
chrchr4H:+:618414859..618416109
Molecular Weight (calculated)
27746.2 Da
IEP (calculated)
5.733
GRAVY (calculated)
-0.129
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: PSLKFNLFVT LAISYSHLPS VSEEAAMAAP VTVYGPAISP AVARVAACLL EKDVPFQLEA VDMSKGEHKS PSFLKLQPFG QVPAFKDHLT TVFESRAICR
101: YICDQYSDRG NRTLLGRQED GAVGRAAIEQ WIESEGQAFN PPSLAIAFQL TFAPLMGMAT DMAVVEQNEA KLAKVLDVYE GRLAESQYFA GDEFTLADLV
201: HMPNTDLLVS KTGKAGLITE RKNLSRWWDE VSARPSWKKV VELQSAPRPP RS
101: YICDQYSDRG NRTLLGRQED GAVGRAAIEQ WIESEGQAFN PPSLAIAFQL TFAPLMGMAT DMAVVEQNEA KLAKVLDVYE GRLAESQYFA GDEFTLADLV
201: HMPNTDLLVS KTGKAGLITE RKNLSRWWDE VSARPSWKKV VELQSAPRPP RS
001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY
Arabidopsis Description
GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.