Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G302300.1 | Wheat | cytosol | 93.12 | 93.12 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 95.87 | 92.48 |
| TraesCS3B01G334300.1 | Wheat | cytosol | 90.37 | 90.37 |
| TraesCS3D01G299700.1 | Wheat | cytosol | 90.83 | 83.9 |
| Zm00001d012675_P001 | Maize | plastid | 71.56 | 72.9 |
| EES03661 | Sorghum | cytosol | 70.64 | 71.96 |
| Os01t0764000-01 | Rice | cytosol | 70.64 | 71.63 |
| KXG37119 | Sorghum | cytosol | 73.39 | 61.54 |
| HORVU3Hr1G074040.3 | Barley | cytosol, plasma membrane | 76.61 | 58.19 |
| HORVU7Hr1G039140.3 | Barley | cytosol | 57.34 | 57.08 |
| HORVU2Hr1G095460.1 | Barley | cytosol | 52.75 | 52.75 |
| HORVU5Hr1G118800.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.67 | 52.7 |
| HORVU1Hr1G002160.2 | Barley | cytosol | 51.83 | 52.56 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 51.38 | 51.85 |
| HORVU1Hr1G021140.1 | Barley | endoplasmic reticulum | 51.38 | 50.22 |
| HORVU7Hr1G116650.3 | Barley | cytosol | 48.17 | 48.39 |
| HORVU5Hr1G006630.2 | Barley | cytosol | 50.92 | 48.26 |
| HORVU7Hr1G036850.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.54 | 48.0 |
| HORVU1Hr1G021180.1 | Barley | cytosol | 49.08 | 45.53 |
| HORVU1Hr1G021160.5 | Barley | cytosol | 48.17 | 45.45 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 44.95 | 45.16 |
| KRH31902 | Soybean | cytosol | 44.95 | 44.95 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 44.5 | 44.7 |
| HORVU5Hr1G104670.2 | Barley | cytosol | 49.08 | 44.58 |
| HORVU3Hr1G097950.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.58 | 44.39 |
| KRH71551 | Soybean | cytosol | 44.5 | 44.09 |
| HORVU1Hr1G021170.1 | Barley | cytosol | 45.87 | 43.29 |
| HORVU3Hr1G117390.1 | Barley | cytosol | 50.0 | 42.75 |
| HORVU3Hr1G117370.1 | Barley | cytosol | 50.0 | 42.25 |
| HORVU1Hr1G017050.1 | Barley | plastid | 43.12 | 41.96 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.28 | 41.1 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.28 | 41.1 |
| CDX93963 | Canola | cytosol | 40.37 | 40.18 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 48.17 | 39.77 |
| AT3G62760.1 | Thale cress | cytosol | 38.99 | 38.81 |
| HORVU3Hr1G097900.3 | Barley | cytosol | 38.07 | 37.22 |
| HORVU3Hr1G097870.1 | Barley | plastid | 36.7 | 30.19 |
| HORVU4Hr1G081100.1 | Barley | endoplasmic reticulum | 33.49 | 28.97 |
| HORVU4Hr1G081150.1 | Barley | cytosol | 28.9 | 28.25 |
| HORVU4Hr1G081110.1 | Barley | cytosol | 27.52 | 26.91 |
| HORVU1Hr1G052470.2 | Barley | cytosol | 26.15 | 21.92 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 25.23 | 13.92 |
| HORVU5Hr1G085070.43 | Barley | cytosol | 24.77 | 2.26 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | UniProt:A0A287LNH2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU3Hr1G074000 | EnsemblPlants:HORVU3Hr1G074000.1 |
| InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 |
| PANTHER:PTHR43900 | PANTHER:PTHR43900:SF10 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | UniParc:UPI000B4665D6 |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:A0A287LNH2]
Coordinates
chrchr3H:+:556576675..556578906
Molecular Weight (calculated)
24474.6 Da
IEP (calculated)
6.390
GRAVY (calculated)
-0.062
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVKLYGMT LSWNVTRCVA ALEEAGVEYD VVPIDFGAGE HKTPEHLTRN PFGQMPVLQD GDFYVWGMSA ICKYTCRKNK PELLKEGDLN ESAMVDVWLE
101: VEAHQYTAAL EPIILECLVR PMFGRATDQK TVEENLVKFK KVLEVYEAHL TRCKYLAGDF LSLADLNHVS ATACLAATPY ASLFDAYPHV KAWWSGLMAR
201: PSVQKIAALK KPYFHNSV
101: VEAHQYTAAL EPIILECLVR PMFGRATDQK TVEENLVKFK KVLEVYEAHL TRCKYLAGDF LSLADLNHVS ATACLAATPY ASLFDAYPHV KAWWSGLMAR
201: PSVQKIAALK KPYFHNSV
001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
Arabidopsis Description
GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.