Factsheet for HORVU3Hr1G074040.3

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G299900.1	Wheat	extracellular, golgi	71.78	97.17
TraesCS3B01G334500.1	Wheat	cytosol	71.78	97.17
TraesCS3A01G302100.1	Wheat	cytosol	70.38	95.28
Zm00001d012675_P001	Maize	plastid	59.58	79.91
EES03661	Sorghum	cytosol	58.88	78.97
HORVU3Hr1G074020.5	Barley	cytosol	60.63	76.99
HORVU3Hr1G074000.1	Barley	cytosol	58.19	76.61
Os01t0764000-01	Rice	cytosol	56.45	75.35
KXG37119	Sorghum	cytosol	57.14	63.08
HORVU7Hr1G039140.3	Barley	cytosol	46.69	61.19
GSMUA_Achr2P02330_001	Banana	cytosol	44.6	59.26
HORVU1Hr1G002160.2	Barley	cytosol	41.81	55.81
HORVU1Hr1G021140.1	Barley	endoplasmic reticulum	42.51	54.71
HORVU2Hr1G095460.1	Barley	cytosol	41.46	54.59
HORVU5Hr1G118800.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.12	53.15
HORVU7Hr1G116650.3	Barley	cytosol	39.72	52.53
HORVU7Hr1G036850.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.77	52.0
VIT_07s0104g01800.t01	Wine grape	cytosol	37.98	50.23
KRH31902	Soybean	cytosol	37.98	50.0
HORVU1Hr1G021180.1	Barley	cytosol	40.77	49.79
HORVU5Hr1G006630.2	Barley	cytosol	39.72	49.57
VIT_07s0104g01810.t01	Wine grape	cytosol	37.28	49.31
KRH71551	Soybean	cytosol	37.63	49.09
HORVU5Hr1G104670.2	Barley	cytosol	40.07	47.92
HORVU3Hr1G117390.1	Barley	cytosol	42.16	47.45
HORVU1Hr1G021160.5	Barley	cytosol	37.98	47.19
HORVU3Hr1G117370.1	Barley	cytosol	42.16	46.9
HORVU3Hr1G097950.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.49	46.26
HORVU1Hr1G021170.1	Barley	cytosol	36.93	45.89
HORVU1Hr1G021150.2	Barley	cytosol, plastid	40.42	43.94
HORVU1Hr1G017050.1	Barley	plastid	33.45	42.86
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.4	42.47
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.4	42.47
AT3G62760.1	Thale cress	cytosol	32.4	42.47
CDX93963	Canola	cytosol	32.06	42.01
HORVU3Hr1G097900.3	Barley	cytosol	31.01	39.91
HORVU3Hr1G097870.1	Barley	plastid	30.31	32.83
HORVU4Hr1G081100.1	Barley	endoplasmic reticulum	28.22	32.14
HORVU4Hr1G081150.1	Barley	cytosol	24.39	31.39
HORVU4Hr1G081110.1	Barley	cytosol	23.0	29.6
HORVU1Hr1G052470.2	Barley	cytosol	20.56	22.69
HORVU4Hr1G081170.1	Barley	cytosol, peroxisome, plastid	21.25	15.44
HORVU5Hr1G085070.43	Barley	cytosol	20.91	2.52
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	UniProt:A0A287LNI8	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
EnsemblPlantsGene:HORVU3Hr1G074040	EnsemblPlants:HORVU3Hr1G074040.3	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF10	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000B487C2C	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:556701735..556704983

Molecular Weight (calculated)

32171.1 Da

IEP (calculated)

8.995

GRAVY (calculated)

-0.257

Length

287 amino acids

Sequence
(BLAST)

001: GPIDQPHPPP HLTYPLPLPL HLLHRKGAAV RLHCLFSRDP ERGHFPIPSR PIPSHPRRRD RKKKVRGRCG VRRDEMAPVK LYGATLSWNV TRCVAALEEA
101: GVEYELVPIN FSTGEHKSPD HLARNPFGQV PALQDGDLYV FESRAICKYA CRKNKPELLK EGDIKESAMV DVWLEVEAHQ YTAALSPILF ECLIHPMLGG
201: ATDQKVIDDN LVKIKNVLAV YEARLTKSKY LAGDFLSLAD LNHASVTLCL AATPYASLFD AYPHVKAWWT DLLTRPSVQK VAALMKP

Best Arabidopsis Sequence Match ( AT1G02920.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNLDFE FVHIELKDGE HKKEPFIFRN PFGKVPAFED GDFKLFESRA ITQYIAHFYS DKGNQLVSLG SKDIAGIAMG
101: IEIESHEFDP VGSKLVWEQV LKPLYGMTTD KTVVEEEEAK LAKVLDVYEH RLGESKYLAS DKFTLVDLHT IPVIQYLLGT PTKKLFDERP HVSAWVADIT
201: SRPSAKKVL

Arabidopsis Description

GSTF7Glutathione S-transferase F7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRY5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.