Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G349700.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 92.34 | 92.34 |
| Os01t0369700-03 | Rice | cytosol | 81.53 | 75.42 |
| HORVU5Hr1G006630.2 | Barley | cytosol | 77.93 | 75.22 |
| EES02961 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 74.77 | 74.77 |
| Zm00001d043344_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 74.32 | 73.66 |
| Os01t0353400-00 | Rice | cytosol | 63.51 | 64.98 |
| HORVU1Hr1G021140.1 | Barley | endoplasmic reticulum | 64.41 | 64.13 |
| HORVU7Hr1G036850.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 61.71 | 60.89 |
| HORVU1Hr1G021180.1 | Barley | cytosol | 62.61 | 59.15 |
| HORVU7Hr1G039140.3 | Barley | cytosol | 56.31 | 57.08 |
| HORVU2Hr1G095460.1 | Barley | cytosol | 54.05 | 55.05 |
| HORVU1Hr1G002160.2 | Barley | cytosol | 52.7 | 54.42 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 64.41 | 54.17 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 52.25 | 53.7 |
| HORVU3Hr1G074000.1 | Barley | cytosol | 52.7 | 53.67 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 53.15 | 52.21 |
| HORVU7Hr1G116650.3 | Barley | cytosol | 50.45 | 51.61 |
| HORVU1Hr1G021160.5 | Barley | cytosol | 52.25 | 50.22 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 48.65 | 49.77 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 47.3 | 48.39 |
| HORVU1Hr1G021170.1 | Barley | cytosol | 50.0 | 48.05 |
| HORVU5Hr1G104670.2 | Barley | cytosol | 51.8 | 47.92 |
| KRH31902 | Soybean | cytosol | 45.5 | 46.33 |
| KRH71551 | Soybean | cytosol | 45.05 | 45.45 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.24 | 43.84 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.24 | 43.84 |
| HORVU3Hr1G097950.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 41.89 | 43.46 |
| AT3G62760.1 | Thale cress | cytosol | 42.79 | 43.38 |
| CDX93963 | Canola | cytosol | 42.79 | 43.38 |
| HORVU3Hr1G117390.1 | Barley | cytosol | 49.1 | 42.75 |
| HORVU1Hr1G017050.1 | Barley | plastid | 42.79 | 42.41 |
| HORVU3Hr1G117370.1 | Barley | cytosol | 49.1 | 42.25 |
| HORVU3Hr1G074040.3 | Barley | cytosol, plasma membrane | 53.15 | 41.12 |
| HORVU3Hr1G097900.3 | Barley | cytosol | 35.14 | 34.98 |
| HORVU4Hr1G081150.1 | Barley | cytosol | 30.18 | 30.04 |
| HORVU4Hr1G081110.1 | Barley | cytosol | 29.28 | 29.15 |
| HORVU3Hr1G097870.1 | Barley | plastid | 34.23 | 28.68 |
| HORVU4Hr1G081100.1 | Barley | endoplasmic reticulum | 31.98 | 28.17 |
| HORVU1Hr1G052470.2 | Barley | cytosol | 31.08 | 26.54 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 30.18 | 16.96 |
| HORVU5Hr1G085070.43 | Barley | cytosol | 28.38 | 2.64 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU5Hr1G118800 | EnsemblPlants:HORVU5Hr1G118800.1 |
| InterPro:IPR004045 | InterPro:IPR010987 | UniProt:M0YMJ9 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF13 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI00029652C4 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:653790777..653794679
Molecular Weight (calculated)
25150.4 Da
IEP (calculated)
5.678
GRAVY (calculated)
-0.118
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMKVYGWA VSPWMARVLV CLEEAGAEYE IVPMSRSGGD HRQPDHLTRN PFGEIPVLED GDLTLYQSRA IARYILRKYK PELLRTGNLA ESAMVDVWLD
101: VEALQHEPIV RPIVANCIVY PFEGRSRDQE IVDEKIERLK KLLEVYESRL SGSKYLAGDF ISLADLSHFS LMRYFMATEY ADLLDAYPHV KAWWAALLAR
201: PSVKKVMAGM PPDFGFGSGN IP
101: VEALQHEPIV RPIVANCIVY PFEGRSRDQE IVDEKIERLK KLLEVYESRL SGSKYLAGDF ISLADLSHFS LMRYFMATEY ADLLDAYPHV KAWWAALLAR
201: PSVKKVMAGM PPDFGFGSGN IP
001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
Arabidopsis Description
GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.