Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 5
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G452900.1 | Wheat | golgi | 92.52 | 92.96 |
| TraesCS3D01G445400.1 | Wheat | golgi | 92.06 | 92.49 |
| TraesCS3B01G490600.3 | Wheat | golgi | 95.33 | 89.08 |
| Zm00001d042216_P001 | Maize | extracellular, plasma membrane | 75.23 | 72.85 |
| KXG34068 | Sorghum | endoplasmic reticulum | 72.43 | 70.78 |
| Os01t0933900-01 | Rice | mitochondrion | 71.5 | 69.23 |
| GSMUA_Achr11P... | Banana | unclear | 60.28 | 62.62 |
| HORVU3Hr1G097900.3 | Barley | cytosol | 64.02 | 61.44 |
| HORVU3Hr1G097870.1 | Barley | plastid | 62.15 | 50.19 |
| HORVU3Hr1G074000.1 | Barley | cytosol | 44.39 | 43.58 |
| HORVU3Hr1G074020.5 | Barley | cytosol | 45.79 | 43.36 |
| HORVU7Hr1G039140.3 | Barley | cytosol | 43.46 | 42.47 |
| HORVU5Hr1G118800.1 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.46 | 41.89 |
| HORVU1Hr1G002160.2 | Barley | cytosol | 41.59 | 41.4 |
| HORVU7Hr1G036850.2 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.46 | 41.33 |
| HORVU1Hr1G021140.1 | Barley | endoplasmic reticulum | 42.99 | 41.26 |
| HORVU1Hr1G021180.1 | Barley | cytosol | 44.39 | 40.43 |
| HORVU2Hr1G095460.1 | Barley | cytosol | 40.19 | 39.45 |
| HORVU7Hr1G116650.3 | Barley | cytosol | 38.78 | 38.25 |
| HORVU4Hr1G081100.1 | Barley | endoplasmic reticulum | 44.39 | 37.7 |
| HORVU1Hr1G021170.1 | Barley | cytosol | 39.72 | 36.8 |
| HORVU1Hr1G021160.5 | Barley | cytosol | 38.32 | 35.5 |
| HORVU4Hr1G081150.1 | Barley | cytosol | 36.92 | 35.43 |
| HORVU1Hr1G021150.2 | Barley | cytosol, plastid | 42.99 | 34.85 |
| HORVU5Hr1G006630.2 | Barley | cytosol | 37.38 | 34.78 |
| HORVU5Hr1G104670.2 | Barley | cytosol | 38.78 | 34.58 |
| HORVU3Hr1G117390.1 | Barley | cytosol | 41.12 | 34.51 |
| HORVU3Hr1G074040.3 | Barley | cytosol, plasma membrane | 46.26 | 34.49 |
| HORVU3Hr1G117370.1 | Barley | cytosol | 41.12 | 34.11 |
| HORVU4Hr1G081110.1 | Barley | cytosol | 35.05 | 33.63 |
| HORVU1Hr1G017050.1 | Barley | plastid | 33.64 | 32.14 |
| HORVU1Hr1G052470.2 | Barley | cytosol | 34.58 | 28.46 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 33.64 | 18.23 |
| HORVU5Hr1G085070.43 | Barley | cytosol | 32.24 | 2.89 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | EMBL:AK358820 | UniProt:F2D4L0 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:GST_C | InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | EnsemblPlantsGene:HORVU3Hr1G097950 |
| EnsemblPlants:HORVU3Hr1G097950.2 | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF19 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI0002005C79 | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D4L0]
Coordinates
chrchr3H:+:657358643..657360240
Molecular Weight (calculated)
23573.5 Da
IEP (calculated)
5.938
GRAVY (calculated)
0.009
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPMKLYGMM LSPNVTRVAT VLNELGLDFE FVSVDLRTGA HKQPDFLKLN PFGQIPALQD GDEVVFESRA INRYIATKYG AAELLPTPSA KLEVWLEVES
101: HHFYPPVRAL VYELLIKPML GAPTDAAEVN KNAADLDKLL DVYEAHLAAG NKYLAGDAFT LADANHMSYL FMLTKSPKAD LVASRPHVKA WWDEISARPA
201: WAKTVASIPL PPGV
101: HHFYPPVRAL VYELLIKPML GAPTDAAEVN KNAADLDKLL DVYEAHLAAG NKYLAGDAFT LADANHMSYL FMLTKSPKAD LVASRPHVKA WWDEISARPA
201: WAKTVASIPL PPGV
001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ
Arabidopsis Description
GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.