Factsheet for GSMUA_Achr11P20440_001

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

cytosol 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

unclear: 20177697

msms PMID: 20177697 doi

A Vertommen, B Panis, R Swennen, SC Carpentier

Division of Crop Biotechnics, Department of Biosystems, K U Leuven, Leuven, Belgium. Annelies.vertommen@biw.kuleuven.be

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G097950.2	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.62	60.28
TraesCS3D01G445400.1	Wheat	golgi	61.16	59.15
TraesCS3A01G452900.1	Wheat	golgi	61.16	59.15
KXG34068	Sorghum	endoplasmic reticulum	62.62	58.9
Zm00001d042216_P001	Maize	extracellular, plasma membrane	63.11	58.82
Os01t0933900-01	Rice	mitochondrion	62.62	58.37
TraesCS3B01G490600.3	Wheat	golgi	61.65	55.46
GSMUA_Achr2P02330_001	Banana	cytosol	52.91	50.46
TraesCS3B01G490400.1	Wheat	cytosol	54.37	50.0
HORVU3Hr1G097900.3	Barley	cytosol	53.88	49.78
TraesCS3A01G452800.1	Wheat	cytosol	52.91	49.55
TraesCS3D01G445300.1	Wheat	cytosol	53.4	49.33
GSMUA_Achr5P17880_001	Banana	cytosol	45.15	42.08
HORVU3Hr1G097870.1	Barley	plastid	52.43	40.75
GSMUA_Achr4P11730_001	Banana	cytosol	43.2	40.27
GSMUA_Achr2P11180_001	Banana	cytosol	42.23	39.19
GSMUA_Achr4P29630_001	Banana	cytosol	38.84	36.2
GSMUA_Achr1P02260_001	Banana	cytosol	38.35	35.75
GSMUA_Achr1P02270_001	Banana	cytosol	35.92	32.17
GSMUA_Achr7P03960_001	Banana	cytosol	43.2	23.06
GSMUA_Achr3P26860_001	Banana	cytosol	33.98	22.29
GSMUA_Achr4P04940_001	Banana	cytosol	43.69	19.74

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr11G20440_001	EnsemblPlants:GSMUA_Achr11P20440_001
EnsemblPlants:GSMUA_Achr11T20440_001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M0RTX4	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF19	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI000294BB12	:	:	:	:	:

Description

Glutathione S-transferase 3 [Source:GMGC_GENE;Acc:GSMUA_Achr11G20440_001]

Coordinates

chr11:+:21435900..21437474

Molecular Weight (calculated)

22609.2 Da

IEP (calculated)

5.051

GRAVY (calculated)

0.077

Length

206 amino acids

Sequence
(BLAST)

001: MSTNTVRVLA ALNEKGVEFE LVIVDLRTGA HKKPDFLALN PFGQIPALED GDVVLFESRA INRYIATKYA EAGPDLLLSS GTPAERAVVD LWLEVESQQF
101: GPPIAALVYE ALIKPMLGGA TDVTVVEAQA TKLEKVLDVY EARLAQSKYL AGAEFTLVDL NHIPYTNYLM KTPKASLVTS RPHLLAWWQD VSSRPAWQKT
201: AAAIPF

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.