Factsheet for GSMUA_Achr5P17880_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P11180_001	Banana	cytosol	81.0	80.63
VIT_18s0001g00690.t01	Wine grape	cytosol	70.59	69.96
PGSC0003DMT400075626	Potato	cytosol	64.71	64.71
Solyc12g094430.1.1	Tomato	plastid	64.71	64.71
EER92907	Sorghum	cytosol, plastid	63.35	62.5
TraesCS4D01G328000.1	Wheat	peroxisome	63.35	61.95
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	63.35	61.95
Os03t0135300-01	Rice	plastid	62.44	61.61
TraesCS5A01G502500.1	Wheat	endoplasmic reticulum, peroxisome	62.9	61.5
Zm00001d027542_P001	Maize	endoplasmic reticulum	62.44	57.74
HORVU4Hr1G081100.1	Barley	endoplasmic reticulum	62.44	54.76
GSMUA_Achr4P29630_001	Banana	cytosol	54.75	54.75
GSMUA_Achr1P02260_001	Banana	cytosol	50.68	50.68
GSMUA_Achr1P02270_001	Banana	cytosol	51.58	49.57
GSMUA_Achr11P...	Banana	unclear	42.08	45.15
GSMUA_Achr2P02330_001	Banana	cytosol	42.08	43.06
GSMUA_Achr4P11730_001	Banana	cytosol	41.63	41.63
GSMUA_Achr3P26860_001	Banana	cytosol	51.13	35.99
GSMUA_Achr7P03960_001	Banana	cytosol	53.85	30.83
GSMUA_Achr4P04940_001	Banana	cytosol	41.18	19.96

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G17880_001	EnsemblPlants:GSMUA_Achr5P17880_001
EnsemblPlants:GSMUA_Achr5T17880_001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M0SZG7	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00029520E4

Description

Putative Glutathione S-transferase PARB [Source:GMGC_GENE;Acc:GSMUA_Achr5G17880_001]

Coordinates

chr5:+:19035849..19036902

Molecular Weight (calculated)

24520.2 Da

IEP (calculated)

6.923

GRAVY (calculated)

-0.278

Length

221 amino acids

Sequence
(BLAST)

001: MGSVTVYGPP ISTAVSRVLA CLLEKDVDFK LVNVDMAKGQ HKSPDYLKLQ PFGQVPAFQD EHATLFESRA ICRYICDKYA NRGNQSLFGR NGGGPAERAQ
101: VEQWLEAESQ SFNPPSSALV FQLAFAPRMG LPQDPAAIEL NQAKLAKVLD VYERRLGESR FLAGDEFALA DLAHLPNAHY ICAAGKDDMF ASRKNVARWW
201: EEISTRPSWK KVVDMFSAPP A

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.