Factsheet for GSMUA_Achr1P02270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G502400.1	Wheat	cytosol	60.43	62.33
TraesCS4D01G327900.1	Wheat	cytosol	60.43	62.33
TraesCS4D01G327800.1	Wheat	cytosol	59.57	61.44
HORVU4Hr1G081150.1	Barley	cytosol	59.57	61.44
TraesCS4B01G330900.1	Wheat	cytosol	59.13	60.99
EER92908	Sorghum	cytosol	59.57	60.62
HORVU4Hr1G081110.1	Barley	cytosol	58.7	60.54
TraesCS5A01G502300.1	Wheat	cytosol	58.7	60.54
Os03t0135100-01	Rice	extracellular	59.13	60.44
Zm00001d048354_P001	Maize	extracellular	59.13	60.18
Zm00001d027540_P001	Maize	nucleus	58.26	59.56
Zm00001d027541_P001	Maize	extracellular	58.26	59.29
Zm00001d048353_P001	Maize	extracellular	57.83	59.11
OQU93289	Sorghum	cytosol	57.39	58.67
TraesCS4B01G331000.1	Wheat	cytosol, plastid	60.43	56.28
GSMUA_Achr1P02260_001	Banana	cytosol	53.04	55.2
GSMUA_Achr4P29630_001	Banana	cytosol	51.74	53.85
GSMUA_Achr2P11180_001	Banana	cytosol	50.43	52.25
GSMUA_Achr5P17880_001	Banana	cytosol	49.57	51.58
EER92000	Sorghum	cytosol	49.57	47.3
GSMUA_Achr2P02330_001	Banana	cytosol	34.78	37.04
GSMUA_Achr4P11730_001	Banana	cytosol	35.22	36.65
GSMUA_Achr11P...	Banana	unclear	32.17	35.92
GSMUA_Achr3P26860_001	Banana	cytosol	45.22	33.12
GSMUA_Achr7P03960_001	Banana	cytosol	45.22	26.94
GSMUA_Achr4P04940_001	Banana	cytosol	34.35	17.32

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr1G02270_001	EnsemblPlants:GSMUA_Achr1P02270_001
EnsemblPlants:GSMUA_Achr1T02270_001	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:M0RWD5	PFAM:PF00043	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR43900	PANTHER:PTHR43900:SF16	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002954BE5

Description

Putative Glutathione S-transferase 6, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr1G02270_001]

Coordinates

chr1:-:1837562..1838412

Molecular Weight (calculated)

25958.3 Da

IEP (calculated)

7.504

GRAVY (calculated)

-0.217

Length

230 amino acids

Sequence
(BLAST)

001: MTMLKVFGQP AATDVARVLT CLFEKDLQFQ IVRIDSFKGE HKVPVFLRVV CLLLHSALQN PCGQVTFKDG DVTLVDSRDI CRHISKKYED KGNKALSGTG
101: FLQRASIEQW LQAEAVSFEP PTSALVFQLT FAPALHMPPD EELIQQNEEK LSKVLDIYNS RLGKSEYLTG DTFTLADLSH LPNSHYLTMS ERGRKLFETR
201: GNVARWCTAI SARPSWKQVV EMQSERPGLI

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.