CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048353_P001	Maize	extracellular	95.11	95.11
Zm00001d027540_P001	Maize	nucleus	95.11	95.11
Os03t0135100-01	Rice	extracellular	83.56	83.56
HORVU4Hr1G081150.1	Barley	cytosol	81.78	82.51
TraesCS4D01G327800.1	Wheat	cytosol	81.33	82.06
TraesCS5A01G502300.1	Wheat	cytosol	80.89	81.61
TraesCS4B01G330900.1	Wheat	cytosol	80.89	81.61
EER92908	Sorghum	cytosol	76.89	76.55
GSMUA_Achr1P02270_001	Banana	cytosol	58.67	57.39
EER92000	Sorghum	cytosol	57.78	53.94
EER92907	Sorghum	cytosol, plastid	46.67	46.88
KXG34068	Sorghum	endoplasmic reticulum	35.11	36.07
EES05217	Sorghum	cytosol	34.67	34.82
KXG38989	Sorghum	cytosol	44.44	34.01
EER92911	Sorghum	cytosol	44.44	33.22
EES12862	Sorghum	cytosol	33.78	33.19
EES15857	Sorghum	cytosol	32.44	33.18
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.0	31.86
EES03661	Sorghum	cytosol	30.22	31.78
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	29.33	30.84
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.89	29.28
EES15859	Sorghum	cytosol	28.44	28.83
EES15858	Sorghum	cytosol	28.0	28.51
EES17713	Sorghum	endoplasmic reticulum, extracellular	28.44	27.95
KXG37119	Sorghum	cytosol	29.33	25.38
EES13729	Sorghum	cytosol	39.56	8.82
OQU89855	Sorghum	cytosol	41.33	2.71

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:8057409	UniProt:C5WZ11	ProteinID:EER92910.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016740
InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EnsemblPlants:OQU93289	ProteinID:OQU93289	ProteinID:OQU93289.1	ProteinID:OQU93290.1	PFAM:PF00043
PFAM:PF13417	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF5	EnsemblPlantsGene:SORBI_3001G514300
SUPFAM:SSF47616	SUPFAM:SSF52833	unigene:Sbi.2863	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A82C92	RefSeq:XP_002465912.1

Description

hypothetical protein

Coordinates

chr1:+:78155741..78157975

Molecular Weight (calculated)

25732.5 Da

IEP (calculated)

7.661

GRAVY (calculated)

-0.510

Length

225 amino acids

Sequence
(BLAST)

001: MAAGLQVFGQ PASTDVARVL TCLFEKNLEF ELIRTDTFKK SHKLPEFIKL RDPTGQVTFK HGDKTIVDSR AICRYLCTQF PDDGYKKLYG TGSLERASIE
101: QWLQAEAQSF DAPSSELVFQ LAFAPHLKDV RVDEARVAEN EKKLHNMLSV YDDILSKNEY LAGDDFTLAD LSHLPNSHYI VNSSDKGKKL FTARKHVARW
201: YDKISSRDSW KQVIKMQREH PGAFE

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.