Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027539_P001 | Maize | extracellular, mitochondrion, plastid | 89.7 | 88.52 |
| TraesCS4D01G327700.1 | Wheat | cytosol, nucleus, peroxisome | 67.11 | 62.54 |
| GSMUA_Achr1P02260_001 | Banana | cytosol | 45.85 | 62.44 |
| GSMUA_Achr4P29630_001 | Banana | cytosol | 45.85 | 62.44 |
| TraesCS4B01G330800.1 | Wheat | cytosol, nucleus, peroxisome | 67.11 | 62.15 |
| KXG38989 | Sorghum | cytosol | 55.48 | 56.8 |
| HORVU4Hr1G081170.1 | Barley | cytosol, peroxisome, plastid | 66.11 | 50.38 |
| Os03t0135200-01 | Rice | cytosol, plasma membrane | 20.27 | 47.29 |
| EER92907 | Sorghum | cytosol, plastid | 33.22 | 44.64 |
| OQU93289 | Sorghum | cytosol | 33.22 | 44.44 |
| EER92908 | Sorghum | cytosol | 32.23 | 42.92 |
| EER92000 | Sorghum | cytosol | 30.9 | 38.59 |
| EES17713 | Sorghum | endoplasmic reticulum, extracellular | 24.92 | 32.75 |
| EES05217 | Sorghum | cytosol | 24.25 | 32.59 |
| KXG34068 | Sorghum | endoplasmic reticulum | 22.59 | 31.05 |
| EES15857 | Sorghum | cytosol | 22.26 | 30.45 |
| EES15858 | Sorghum | cytosol | 22.26 | 30.32 |
| EES15859 | Sorghum | cytosol | 22.26 | 30.18 |
| EES12862 | Sorghum | cytosol | 22.92 | 30.13 |
| KXG21305 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.93 | 29.44 |
| EES02961 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.93 | 28.38 |
| EES17708 | Sorghum | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.93 | 27.88 |
| EES03661 | Sorghum | cytosol | 18.6 | 26.17 |
| KXG37119 | Sorghum | cytosol | 18.94 | 21.92 |
| Os03t0134900-01 | Rice | extracellular | 13.29 | 12.54 |
| EES13729 | Sorghum | cytosol | 29.9 | 8.92 |
| OQU89855 | Sorghum | cytosol | 28.9 | 2.54 |
Protein Annotations
| Gene3D:1.20.1050.10 | Gene3D:3.40.30.10 | MapMan:35.1 | EntrezGene:8085671 | UniProt:C5WZ12 | ncoils:Coil |
| EnsemblPlants:EER92911 | ProteinID:EER92911 | ProteinID:EER92911.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016740 | InterPro:GST_C |
| InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 | PFAM:PF00043 |
| PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF8 | EnsemblPlantsGene:SORBI_3001G514400 |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | unigene:Sbi.3380 | InterPro:Thioredoxin-like_sf | UniParc:UPI0001A82C93 | RefSeq:XP_002465913.1 |
Description
hypothetical protein
Coordinates
chr1:+:78160422..78162432
Molecular Weight (calculated)
33681.4 Da
IEP (calculated)
7.237
GRAVY (calculated)
-0.713
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVKVFGSP TSAEVARVLM CLFEKEVEFQ LIRVDAYRGT KRMPQYLKLQ PHGEALTFED ESLTLSDSRG ILRHISYKYA KQGNPDLIGT GALERASIEQ
101: WLQTEAQSFD SPSAEMVYSL AILPPTLPRQ QNDNNGTGSG FNARDVAVGS NADASSGKRG VAGSEQPAAS QNQLSPQKEE EMLKLFGQRK KDLEKLLDIY
201: EQRLEEARFL AGDNFTIADL SHLPNADRLV SDPRSRRLFE SRKNVSRWWH DVSNRETWKY VKSLQRPPST STDASAMNAQ GQQQHLPGST DGHGVKNERH
301: F
101: WLQTEAQSFD SPSAEMVYSL AILPPTLPRQ QNDNNGTGSG FNARDVAVGS NADASSGKRG VAGSEQPAAS QNQLSPQKEE EMLKLFGQRK KDLEKLLDIY
201: EQRLEEARFL AGDNFTIADL SHLPNADRLV SDPRSRRLFE SRKNVSRWWH DVSNRETWKY VKSLQRPPST STDASAMNAQ GQQQHLPGST DGHGVKNERH
301: F
001: MVVKVYGQIK AANPQRVLLC FLEKDIEFEV IHVDLDKLEQ KKPQHLLRQP FGQVPAIEDG YLKLFESRAI ARYYATKYAD QGTDLLGKTL EGRAIVDQWV
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY
101: EVENNYFYAV ALPLVMNVVF KPKSGKPCDV ALVEELKVKF DKVLDVYENR LATNRYLGGD EFTLADLSHM PGMRYIMNET SLSGLVTSRE NLNRWWNEIS
201: ARPAWKKLME LAAY
Arabidopsis Description
GSTF11Glutathione S-transferase F11 [Source:UniProtKB/Swiss-Prot;Acc:Q96324]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.