Factsheet for TraesCS4B01G330800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	96.92	97.52
HORVU4Hr1G081170.1	Barley	cytosol, peroxisome, plastid	88.92	73.16
TraesCS1B01G217700.1	Wheat	cytosol	53.85	67.31
EER92911	Sorghum	cytosol	62.15	67.11
Zm00001d027539_P001	Maize	extracellular, mitochondrion, plastid	62.46	66.56
GSMUA_Achr4P29630_001	Banana	cytosol	41.23	60.63
GSMUA_Achr1P02260_001	Banana	cytosol	40.92	60.18
Os03t0135200-01	Rice	cytosol, plasma membrane	18.46	46.51
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	30.77	44.25
TraesCS4B01G330900.1	Wheat	cytosol	29.85	43.5
TraesCS4B01G331000.1	Wheat	cytosol, plastid	31.08	40.89
TraesCS1B01G097200.1	Wheat	cytosol	22.77	33.79
TraesCS2B01G420800.1	Wheat	cytosol	22.46	33.64
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	22.77	33.18
TraesCS7B01G084400.1	Wheat	endoplasmic reticulum	22.46	32.59
TraesCS1B01G097400.1	Wheat	cytosol	21.85	32.42
TraesCS4B01G059300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.46	31.88
TraesCS5B01G435000.1	Wheat	cytosol	21.23	31.65
TraesCS1B01G113500.1	Wheat	endoplasmic reticulum	21.54	31.53
TraesCS3B01G490600.3	Wheat	golgi	22.15	31.44
TraesCS7B01G096300.1	Wheat	cytosol	20.92	31.05
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	21.54	30.97
TraesCS7B01G443300.1	Wheat	cytosol	20.62	30.88
TraesCS1B01G113600.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.23	30.8
TraesCS5B01G021800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.92	30.63
TraesCS5B01G020700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.92	30.63
TraesCS3B01G490400.1	Wheat	cytosol	20.92	30.36
TraesCS7B01G398800.1	Wheat	cytosol	16.62	30.34
TraesCS1B01G113800.1	Wheat	cytosol	20.92	30.09
TraesCS3B01G334300.1	Wheat	cytosol	19.08	28.44
TraesCS5B01G020900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.0	27.9
TraesCS1B01G114400.1	Wheat	cytosol	16.31	27.89
TraesCS5B01G021100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.31	27.73
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.85	27.41
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.85	27.41
TraesCS3B01G334500.1	Wheat	cytosol	17.54	26.89
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.85	24.07
TraesCS1B01G019400.1	Wheat	cytosol	8.92	23.97
TraesCS5B01G259700.1	Wheat	mitochondrion	19.38	22.91
TraesCS3B01G068300.1	Wheat	cytosol	30.15	12.6
Os03t0134900-01	Rice	extracellular	12.0	12.23

Protein Annotations

MapMan:18.8.1.5	Gene3D:3.40.30.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF8
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS4B01G330800	EnsemblPlants:TraesCS4B01G330800.1	SEG:seg

Description

No Description!

Coordinates

chr4B:-:621674422..621675847

Molecular Weight (calculated)

36382.3 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.850

Length

325 amino acids

Sequence
(BLAST)

001: MASVKVFGSP MSAEVARVLM CLFEKDVEFQ LIRVDAYRGP KRMPQYLKLQ PLGEALTFED GSLTLSESRG ILRHISHKYA MQGNPDLIGT GALERASIEQ
101: WLQTEAQSFD EPSAQMVYSL AFLPPAMPQK LNNGDGDGNG NSNGSNGTRA VVNASAKRVT AAGAAKEEEM RKLFEKSQRE LEKLLDIYEQ RLEEAEYLAG
201: DKFTIADLSH LPNADRLAAD PRSRRMFQRR KNVSRWWDKV SQREAWTYVK SLQRPPTSNG AGADAAAAKN QQQPRSGEAR DGSSDSHNYQ RDQYADASDG
301: GSNYQRSQYG EHRDYQQSRT GDARY

Best Arabidopsis Sequence Match ( AT2G30870.1 )
(BLAST)

001: MVLTIYAPLF ASSKRAVVTL VEKGVSFETV NVDLMKGEQR QPEYLAIQPF GKIPVLVDGD YKIFESRAIM RYIAEKYRSQ GPDLLGKTIE ERGQVEQWLD
101: VEATSYHPPL LALTLNIVFA PLMGFPADEK VIKESEEKLA EVLDVYEAQL SKNEYLAGDF VSLADLAHLP FTEYLVGPIG KAHLIKDRKH VSAWWDKISS
201: RAAWKEVSAK YSLPV

Arabidopsis Description

GSTF10Glutathione S-transferase F10 [Source:UniProtKB/Swiss-Prot;Acc:P42761]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.