Factsheet for TraesCS5B01G021100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G020700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.45	90.54
TraesCS5B01G021800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	84.03	90.09
TraesCS5A01G024000.1	Wheat	cytosol	84.87	85.59
HORVU5Hr1G006630.2	Barley	cytosol	81.09	83.91
TraesCS5B01G020900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.79	76.39
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.23	72.07
Os01t0369700-03	Rice	cytosol	71.85	71.25
Zm00001d043344_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.13	69.2
Os01t0353400-00	Rice	cytosol	57.14	62.67
TraesCS1B01G113500.1	Wheat	endoplasmic reticulum	58.4	62.61
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	56.72	60.54
TraesCS1B01G113600.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.72	60.27
TraesCS7B01G084400.1	Wheat	endoplasmic reticulum	55.88	59.38
TraesCS1B01G097400.1	Wheat	cytosol	53.78	58.45
TraesCS1B01G097200.1	Wheat	cytosol	52.94	57.53
TraesCS1B01G114400.1	Wheat	cytosol	45.38	56.84
TraesCS7B01G096300.1	Wheat	cytosol	52.1	56.62
TraesCS7B01G398800.1	Wheat	cytosol	40.76	54.49
TraesCS3B01G334500.1	Wheat	cytosol	47.06	52.83
GSMUA_Achr2P02330_001	Banana	cytosol	47.9	52.78
TraesCS2B01G420800.1	Wheat	cytosol	47.9	52.53
TraesCS3B01G334300.1	Wheat	cytosol	46.64	50.92
TraesCS4B01G059300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.9	49.78
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	47.06	49.56
TraesCS5B01G435000.1	Wheat	cytosol	45.38	49.54
TraesCS1B01G113800.1	Wheat	cytosol	46.22	48.67
TraesCS7B01G443300.1	Wheat	cytosol	42.86	47.0
VIT_07s0104g01800.t01	Wine grape	cytosol	41.18	45.16
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.74	44.79
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.74	44.79
VIT_07s0104g01810.t01	Wine grape	cytosol	39.92	43.78
KRH31902	Soybean	cytosol	39.5	43.12
KRH71551	Soybean	cytosol	39.08	42.27
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.66	42.01
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.66	42.01
CDX93963	Canola	cytosol	38.24	41.55
TraesCS1B01G019400.1	Wheat	cytosol	21.01	41.32
AT3G62760.1	Thale cress	cytosol	37.4	40.64
TraesCS5B01G259700.1	Wheat	mitochondrion	45.38	39.27
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.48	38.31
TraesCS3B01G490600.3	Wheat	golgi	34.87	36.24
TraesCS3B01G490400.1	Wheat	cytosol	32.35	34.38
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	27.73	29.2
TraesCS4B01G330900.1	Wheat	cytosol	24.79	26.46
TraesCS1B01G217700.1	Wheat	cytosol	26.05	23.85
TraesCS4B01G331000.1	Wheat	cytosol, plastid	23.95	23.08
TraesCS4B01G330800.1	Wheat	cytosol, nucleus, peroxisome	27.73	20.31
TraesCS3B01G068300.1	Wheat	cytosol	27.31	8.35
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF13	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G021100	EnsemblPlants:TraesCS5B01G021100.1	TIGR:cd03053	TIGR:cd03187
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:20072299..20073864

Molecular Weight (calculated)

27056.8 Da

IEP (calculated)

8.643

GRAVY (calculated)

-0.129

Length

238 amino acids

Sequence
(BLAST)

001: MAPMKVYGWA VSPWMARVLV WLEEAGAEYE LVPMSRNDSD HRRPKHLARN PFGEIPVLED GDLMLYHKPS RFLTSSFRFS SCESRAIARH ILRKYKPELL
101: GAGSLQESAM VDVWVDVDAH QLEPVLKPIV VNCIINPFVG RDVEQGIVDE SVQKLKKLLE VYEARLSSNK YLAGDSISFA DLTHFNFMRY FMATKHAVVL
201: DAYPHAKAWW EALLARPSVK KVIAGMPPDF GFGSRRIP

Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)

001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN

Arabidopsis Description

GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.