Factsheet for TraesCS4B01G059300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G133200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.25	98.25
TraesCS3D01G133100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.82	97.82
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.25	86.87
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.25	86.87
TraesCS3A01G309100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.51	85.33
TraesCS3A01G309000.2	Wheat	cytosol	95.2	84.17
HORVU3Hr1G117390.1	Barley	cytosol	86.03	77.25
HORVU3Hr1G117370.1	Barley	cytosol	86.03	76.36
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	96.07	74.58
Os01t0370200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.19	67.43
EES15857	Sorghum	cytosol	62.45	65.0
TraesCS1B01G097400.1	Wheat	cytosol	61.57	64.38
TraesCS1B01G097200.1	Wheat	cytosol	60.7	63.47
TraesCS7B01G096300.1	Wheat	cytosol	57.64	60.27
TraesCS2B01G420800.1	Wheat	cytosol	55.02	58.06
GSMUA_Achr2P02330_001	Banana	cytosol	53.71	56.94
TraesCS3B01G334500.1	Wheat	cytosol	49.78	53.77
TraesCS1B01G113500.1	Wheat	endoplasmic reticulum	51.09	52.7
TraesCS5B01G435000.1	Wheat	cytosol	49.78	52.29
TraesCS3B01G334300.1	Wheat	cytosol	48.47	50.92
TraesCS5B01G020700.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.34	50.9
TraesCS5B01G021800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.91	50.45
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	48.91	50.22
TraesCS1B01G113600.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.47	49.55
TraesCS7B01G084400.1	Wheat	endoplasmic reticulum	48.47	49.55
TraesCS1B01G114300.1	Wheat	endoplasmic reticulum, extracellular	48.03	48.67
TraesCS5B01G021100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.78	47.9
TraesCS1B01G114400.1	Wheat	cytosol	39.74	47.89
TraesCS1B01G113800.1	Wheat	cytosol	47.16	47.79
TraesCS7B01G398800.1	Wheat	cytosol	37.12	47.75
VIT_07s0104g01800.t01	Wine grape	cytosol	44.98	47.47
TraesCS7B01G443300.1	Wheat	cytosol	44.54	47.0
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.54	46.58
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.54	46.58
VIT_07s0104g01810.t01	Wine grape	cytosol	44.1	46.54
AT3G62760.1	Thale cress	cytosol	44.1	46.12
CDX93963	Canola	cytosol	43.67	45.66
TraesCS5B01G020900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	45.41	44.64
TraesCS1B01G019400.1	Wheat	cytosol	23.58	44.63
KRH31902	Soybean	cytosol	42.36	44.5
KRH71551	Soybean	cytosol	42.36	44.09
TraesCS5B01G259700.1	Wheat	mitochondrion	52.84	44.0
TraesCS3B01G490400.1	Wheat	cytosol	36.68	37.5
TraesCS3B01G490600.3	Wheat	golgi	36.24	36.24
TraesCS4B01G331100.1	Wheat	endoplasmic reticulum, peroxisome	31.88	32.3
TraesCS4B01G330900.1	Wheat	cytosol	31.0	31.84
TraesCS4B01G331000.1	Wheat	cytosol, plastid	30.13	27.94
TraesCS1B01G217700.1	Wheat	cytosol	28.82	25.38
TraesCS4B01G330800.1	Wheat	cytosol, nucleus, peroxisome	31.88	22.46
TraesCS3B01G068300.1	Wheat	cytosol	28.38	8.35
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF1	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS4B01G059300	EnsemblPlants:TraesCS4B01G059300.1	TIGR:cd03053	TIGR:cd03187
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:+:50443297..50444172

Molecular Weight (calculated)

25877.4 Da

IEP (calculated)

5.334

GRAVY (calculated)

0.044

Length

229 amino acids

Sequence
(BLAST)

001: MSPVKVFGHP MLTNVARVLL FLEEVGAEYE LVPVDFVAGE HKRPQHVQLN PFAKMPGFQD GDLVLFESRA IAKYILHKYG GTAGLDLLGE NSGIEELAMV
101: DVWTEVEAQQ YYPAISPVVF ECIIIPFIIP GGGAAPNQTV VDESLERLRG VLGIYEARLE KSRYLAGDSI SFADLNHIPF TFYFMTTPYA KVFDEYPKVK
201: AWWEMLMARP AVQRVCKHMP TEFKLRAQY

Best Arabidopsis Sequence Match ( AT1G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL

Arabidopsis Description

GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.