Factsheet for TraesCS3D01G133200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G133100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	99.56	99.56
TraesCS4B01G059300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	98.25	98.25
TraesCS3B01G152200.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	99.13	87.64
TraesCS3B01G152300.3	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	99.13	87.64
TraesCS3A01G309100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	97.38	86.1
TraesCS3A01G309000.2	Wheat	cytosol	96.07	84.94
HORVU3Hr1G117390.1	Barley	cytosol	87.34	78.43
HORVU3Hr1G117370.1	Barley	cytosol	87.34	77.52
TraesCS5D01G418100.1	Wheat	cytosol	74.24	76.92
TraesCS4B01G059100.2	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	95.2	73.9
Os01t0370200-00	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	64.19	67.43
EES15857	Sorghum	cytosol	62.88	65.45
TraesCS1D01G081200.1	Wheat	cytosol	60.7	63.47
TraesCS2D01G400000.2	Wheat	cytosol	57.64	60.83
TraesCS7D01G192500.1	Wheat	cytosol	58.08	60.73
TraesCS2D01G044100.1	Wheat	cytosol	57.21	60.65
TraesCS2D01G579500.1	Wheat	cytosol	55.9	58.45
TraesCS2D01G503200.1	Wheat	cytosol	55.46	57.99
TraesCS5D01G268900.1	Wheat	cytosol	55.46	57.73
GSMUA_Achr2P02330_001	Banana	cytosol	53.71	56.94
TraesCS3D01G299900.1	Wheat	extracellular, golgi	50.66	54.72
TraesCS5D01G440700.1	Wheat	cytosol	51.09	53.67
TraesCS1D01G094700.1	Wheat	endoplasmic reticulum	51.53	53.15
TraesCS1D01G011800.1	Wheat	cytosol	49.78	53.02
TraesCS6D01G016700.1	Wheat	cytosol	54.15	51.03
TraesCS5D01G030000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.34	50.9
TraesCS1D01G094800.1	Wheat	endoplasmic reticulum, extracellular	49.78	50.89
TraesCS7D01G514500.1	Wheat	cytosol	46.72	49.31
TraesCS7D01G479100.1	Wheat	cytosol	47.16	49.09
TraesCS1D01G095000.1	Wheat	cytosol	48.47	48.68
TraesCS1D01G095100.1	Wheat	endoplasmic reticulum, extracellular	48.03	48.67
TraesCS3D01G299700.1	Wheat	cytosol	49.34	47.88
TraesCS1D01G095400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	46.72	47.77
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.98	47.03
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	44.98	47.03
VIT_07s0104g01800.t01	Wine grape	cytosol	44.54	47.0
AT3G62760.1	Thale cress	cytosol	44.54	46.58
CDX93963	Canola	cytosol	44.1	46.12
VIT_07s0104g01810.t01	Wine grape	cytosol	43.67	46.08
KRH31902	Soybean	cytosol	41.48	43.58
KRH71551	Soybean	cytosol	41.48	43.18
TraesCS1D01G094900.1	Wheat	cytosol	46.29	42.57
TraesCS3D01G445400.1	Wheat	golgi	37.12	39.91
TraesCS3D01G445300.1	Wheat	cytosol	35.81	36.77
TraesCS4D01G327800.1	Wheat	cytosol	31.44	32.29
TraesCS4D01G328000.1	Wheat	peroxisome	31.44	31.86
TraesCS4D01G327900.1	Wheat	cytosol	30.57	31.39
TraesCS1D01G207400.1	Wheat	cytosol	28.82	26.09
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	31.44	22.29
TraesCS3D01G055700.1	Wheat	cytosol	28.38	8.58
TraesCS5D01G343100.1	Wheat	cytosol	24.45	1.31
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF1	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS3D01G133200	EnsemblPlants:TraesCS3D01G133200.1	TIGR:cd03053	TIGR:cd03187
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:92783342..92784248

Molecular Weight (calculated)

25815.4 Da

IEP (calculated)

5.113

GRAVY (calculated)

0.046

Length

229 amino acids

Sequence
(BLAST)

001: MSPVKVFGHP MLTNVARVLL FLEEVGAEYE LVPVDFVAGE HKRPQHVQLN PFAKMPGFQD GDLVLFESRA IAKYILRKYG GTAGLDLLGE NSGIEELAMV
101: DMWTEVEAQQ YYPAISPVVF ECIIIPFIIP GGGAAPNQTV VDESLERLRG VLGIYEARLE KSRYLAGDSI SFADLNHIPF TFYFMTTPYA KVFDDYPKVK
201: AWWEMLMARP AVQRVCKHMP TEFKLGAQY

Best Arabidopsis Sequence Match ( AT1G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL

Arabidopsis Description

GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.