Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G013900.1 | Wheat | cytosol | 97.21 | 97.21 |
| HORVU1Hr1G002160.2 | Barley | cytosol | 94.42 | 94.42 |
| Os01t0371500-01 | Rice | cytosol | 70.23 | 69.91 |
| TraesCS7D01G514500.1 | Wheat | cytosol | 66.51 | 65.9 |
| TraesCS5D01G440700.1 | Wheat | cytosol | 60.0 | 59.17 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 57.21 | 56.94 |
| TraesCS3D01G299900.1 | Wheat | extracellular, golgi | 54.88 | 55.66 |
| TraesCS2D01G400000.2 | Wheat | cytosol | 55.81 | 55.3 |
| TraesCS7D01G192500.1 | Wheat | cytosol | 56.28 | 55.25 |
| TraesCS1D01G081200.1 | Wheat | cytosol | 56.28 | 55.25 |
| TraesCS5D01G418100.1 | Wheat | cytosol | 55.81 | 54.3 |
| TraesCS2D01G579500.1 | Wheat | cytosol | 54.42 | 53.42 |
| TraesCS2D01G503200.1 | Wheat | cytosol | 54.42 | 53.42 |
| TraesCS2D01G044100.1 | Wheat | cytosol | 53.02 | 52.78 |
| TraesCS7D01G479100.1 | Wheat | cytosol | 52.56 | 51.36 |
| TraesCS5D01G268900.1 | Wheat | cytosol | 52.09 | 50.91 |
| TraesCS5D01G030000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.63 | 50.0 |
| TraesCS3D01G133200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.02 | 49.78 |
| TraesCS3D01G133100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.02 | 49.78 |
| TraesCS3D01G299700.1 | Wheat | cytosol | 54.42 | 49.58 |
| TraesCS1D01G094700.1 | Wheat | endoplasmic reticulum | 50.23 | 48.65 |
| TraesCS6D01G016700.1 | Wheat | cytosol | 54.42 | 48.15 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 47.44 | 47.0 |
| TraesCS1D01G095400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 48.84 | 46.88 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 46.51 | 46.08 |
| TraesCS1D01G094800.1 | Wheat | endoplasmic reticulum, extracellular | 47.91 | 45.98 |
| TraesCS1D01G095100.1 | Wheat | endoplasmic reticulum, extracellular | 47.91 | 45.58 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.58 | 44.75 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.58 | 44.75 |
| KRH31902 | Soybean | cytosol | 45.12 | 44.5 |
| TraesCS1D01G095000.1 | Wheat | cytosol | 46.98 | 44.3 |
| CDX93963 | Canola | cytosol | 45.12 | 44.29 |
| KRH71551 | Soybean | cytosol | 45.12 | 44.09 |
| AT3G62760.1 | Thale cress | cytosol | 43.72 | 42.92 |
| TraesCS1D01G094900.1 | Wheat | cytosol | 46.05 | 39.76 |
| TraesCS3D01G445400.1 | Wheat | golgi | 38.14 | 38.5 |
| TraesCS3D01G445300.1 | Wheat | cytosol | 37.67 | 36.32 |
| TraesCS4D01G328000.1 | Wheat | peroxisome | 37.21 | 35.4 |
| TraesCS4D01G327800.1 | Wheat | cytosol | 33.49 | 32.29 |
| TraesCS4D01G327900.1 | Wheat | cytosol | 32.56 | 31.39 |
| TraesCS1D01G207400.1 | Wheat | cytosol | 30.23 | 25.69 |
| TraesCS4D01G327700.1 | Wheat | cytosol, nucleus, peroxisome | 31.16 | 20.74 |
| TraesCS3D01G055700.1 | Wheat | cytosol | 29.3 | 8.31 |
| TraesCS5D01G343100.1 | Wheat | cytosol | 26.51 | 1.33 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF6 |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS1D01G011800 | EnsemblPlants:TraesCS1D01G011800.1 | TIGR:cd03053 |
| TIGR:cd03187 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:6351661..6353016
Molecular Weight (calculated)
24133.5 Da
IEP (calculated)
5.331
GRAVY (calculated)
0.076
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPVKVYGLP MNGSVARVLV CLEEVGAEYE VVAVDLHTGE HKRLPHLARN PFGQVPAFQD GDLILFESRA ISKYILRKES SDLLRENNLS ESAMVDVWLD
101: VESQKFDSVM LPIIFQGLVI PVYMGGTSDL KVLEENLEKL KEIMEVYEER LSKSKYLAGD FISLADISHF PMVHLLHETP YASVLDAYPH VKAWIAGVMD
201: RPTVKKVIGL MKTFG
101: VESQKFDSVM LPIIFQGLVI PVYMGGTSDL KVLEENLEKL KEIMEVYEER LSKSKYLAGD FISLADISHF PMVHLLHETP YASVLDAYPH VKAWIAGVMD
201: RPTVKKVIGL MKTFG
001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
Arabidopsis Description
GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.