Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G398800.1 | Wheat | cytosol | 71.82 | 88.76 |
| TraesCS3D01G299900.1 | Wheat | extracellular, golgi | 56.36 | 58.49 |
| TraesCS3D01G299700.1 | Wheat | cytosol | 60.45 | 56.36 |
| GSMUA_Achr2P02330_001 | Banana | cytosol | 54.55 | 55.56 |
| TraesCS1D01G094700.1 | Wheat | endoplasmic reticulum | 55.45 | 54.95 |
| TraesCS7D01G192500.1 | Wheat | cytosol | 53.18 | 53.42 |
| TraesCS2D01G044100.1 | Wheat | cytosol | 52.27 | 53.24 |
| TraesCS5D01G268900.1 | Wheat | cytosol | 52.73 | 52.73 |
| TraesCS1D01G094800.1 | Wheat | endoplasmic reticulum, extracellular | 53.64 | 52.68 |
| TraesCS1D01G011800.1 | Wheat | cytosol | 51.36 | 52.56 |
| TraesCS1D01G081200.1 | Wheat | cytosol | 52.27 | 52.51 |
| TraesCS1D01G095400.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 52.73 | 51.79 |
| TraesCS5D01G030000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 51.36 | 50.9 |
| TraesCS2D01G579500.1 | Wheat | cytosol | 50.45 | 50.68 |
| TraesCS2D01G503200.1 | Wheat | cytosol | 50.45 | 50.68 |
| TraesCS5D01G440700.1 | Wheat | cytosol | 50.0 | 50.46 |
| TraesCS7D01G514500.1 | Wheat | cytosol | 49.55 | 50.23 |
| TraesCS5D01G418100.1 | Wheat | cytosol | 50.45 | 50.23 |
| TraesCS2D01G400000.2 | Wheat | cytosol | 49.09 | 49.77 |
| VIT_07s0104g01810.t01 | Wine grape | cytosol | 46.82 | 47.47 |
| TraesCS1D01G095100.1 | Wheat | endoplasmic reticulum, extracellular | 48.64 | 47.35 |
| TraesCS3D01G133100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.09 | 47.16 |
| TraesCS3D01G133200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 49.09 | 47.16 |
| KRH31902 | Soybean | cytosol | 46.36 | 46.79 |
| TraesCS1D01G095000.1 | Wheat | cytosol | 48.18 | 46.49 |
| Bra014394.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.91 | 46.12 |
| CDX89147 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.91 | 46.12 |
| TraesCS6D01G016700.1 | Wheat | cytosol | 50.91 | 46.09 |
| VIT_07s0104g01800.t01 | Wine grape | cytosol | 45.45 | 46.08 |
| CDX93963 | Canola | cytosol | 45.45 | 45.66 |
| KRH71551 | Soybean | cytosol | 45.45 | 45.45 |
| TraesCS1D01G094900.1 | Wheat | cytosol | 50.91 | 44.98 |
| AT3G62760.1 | Thale cress | cytosol | 43.64 | 43.84 |
| TraesCS3D01G445400.1 | Wheat | golgi | 39.55 | 40.85 |
| TraesCS3D01G445300.1 | Wheat | cytosol | 40.45 | 39.91 |
| TraesCS4D01G328000.1 | Wheat | peroxisome | 38.64 | 37.61 |
| TraesCS4D01G327900.1 | Wheat | cytosol | 31.82 | 31.39 |
| TraesCS4D01G327800.1 | Wheat | cytosol | 31.36 | 30.94 |
| TraesCS1D01G207400.1 | Wheat | cytosol | 30.91 | 26.88 |
| TraesCS4D01G327700.1 | Wheat | cytosol, nucleus, peroxisome | 30.0 | 20.43 |
| TraesCS3D01G055700.1 | Wheat | cytosol | 28.64 | 8.31 |
| TraesCS5D01G343100.1 | Wheat | cytosol | 26.36 | 1.35 |
| CDY18134 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| KEGG:00480+2.5.1.18 | KEGG:00980+2.5.1.18 | KEGG:00982+2.5.1.18 | KEGG:00983+2.5.1.18 | Gene3D:1.20.1050.10 | MapMan:18.8.1.5 |
| Gene3D:3.40.30.10 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:GST_C |
| InterPro:GST_Phi_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N | InterPro:IPR004045 | InterPro:IPR010987 |
| PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 | PFscan:PS50405 | PANTHER:PTHR43900 | PANTHER:PTHR43900:SF10 |
| SUPFAM:SSF47616 | SUPFAM:SSF52833 | InterPro:Thioredoxin-like_sf | EnsemblPlantsGene:TraesCS7D01G479100 | EnsemblPlants:TraesCS7D01G479100.1 | TIGR:cd03053 |
| TIGR:cd03187 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:590416936..590417971
Molecular Weight (calculated)
24973.4 Da
IEP (calculated)
6.881
GRAVY (calculated)
-0.060
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPVVKVYGP AMSWNIARVL VSLEESGVKY ELVAVDFAAA EHKSPAHLAR NPFGQVPVLK DGDFCLWESR AITKYICRKY KPELLGVGNL EGSAMVDVWL
101: EVEAHHYRPL IEAVLMEIRI RPIFGQRVDE RAVEENIDKL KKVLDVYESR LSSSKYLAGD FISLADLNHV STMLCLGITI YTSVLDMYPH VRAWWDDLKG
201: RPAARKVSDL MHMSVKNDLK
101: EVEAHHYRPL IEAVLMEIRI RPIFGQRVDE RAVEENIDKL KKVLDVYESR LSSSKYLAGD FISLADLNHV STMLCLGITI YTSVLDMYPH VRAWWDDLKG
201: RPAARKVSDL MHMSVKNDLK
001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL
Arabidopsis Description
GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.