Factsheet for TraesCS1D01G094900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G113700.1	Wheat	endoplasmic reticulum	85.14	95.07
TraesCS1A01G102800.1	Wheat	cytosol	84.34	93.75
HORVU1Hr1G021150.2	Barley	cytosol, plastid	85.94	81.06
TraesCS1D01G095400.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.68	78.57
TraesCS1D01G094700.1	Wheat	endoplasmic reticulum	69.88	78.38
TraesCS1D01G094800.1	Wheat	endoplasmic reticulum, extracellular	69.88	77.68
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.04	71.03
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.45	67.7
Zm00001d024839_P001	Maize	extracellular	60.24	67.26
Zm00001d010870_P001	Maize	extracellular	59.44	63.25
TraesCS5D01G030000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.22	60.81
GSMUA_Achr2P02330_001	Banana	cytosol	48.59	56.02
TraesCS3D01G299900.1	Wheat	extracellular, golgi	45.78	53.77
TraesCS2D01G044100.1	Wheat	cytosol	46.59	53.7
TraesCS5D01G418100.1	Wheat	cytosol	47.39	53.39
TraesCS5D01G440700.1	Wheat	cytosol	44.98	51.38
TraesCS5D01G268900.1	Wheat	cytosol	45.38	51.36
TraesCS1D01G095100.1	Wheat	endoplasmic reticulum, extracellular	46.59	51.33
TraesCS1D01G095000.1	Wheat	cytosol	46.99	51.32
VIT_07s0104g01800.t01	Wine grape	cytosol	44.58	51.15
TraesCS1D01G081200.1	Wheat	cytosol	44.98	51.14
TraesCS7D01G479100.1	Wheat	cytosol	44.98	50.91
TraesCS7D01G192500.1	Wheat	cytosol	43.78	49.77
VIT_07s0104g01810.t01	Wine grape	cytosol	43.37	49.77
TraesCS2D01G400000.2	Wheat	cytosol	41.37	47.47
KRH71551	Soybean	cytosol	41.77	47.27
KRH31902	Soybean	cytosol	41.37	47.25
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.96	46.58
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.96	46.58
TraesCS3D01G133200.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.57	46.29
TraesCS3D01G133100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.57	46.29
TraesCS3D01G299700.1	Wheat	cytosol	43.78	46.19
TraesCS2D01G503200.1	Wheat	cytosol	40.56	46.12
TraesCS2D01G579500.1	Wheat	cytosol	40.56	46.12
TraesCS1D01G011800.1	Wheat	cytosol	39.76	46.05
CDX93963	Canola	cytosol	40.16	45.66
AT3G62760.1	Thale cress	cytosol	39.36	44.75
TraesCS7D01G514500.1	Wheat	cytosol	38.96	44.7
TraesCS6D01G016700.1	Wheat	cytosol	41.37	42.39
TraesCS3D01G445400.1	Wheat	golgi	36.14	42.25
TraesCS3D01G445300.1	Wheat	cytosol	33.73	37.67
TraesCS4D01G328000.1	Wheat	peroxisome	33.33	36.73
TraesCS4D01G327900.1	Wheat	cytosol	29.32	32.74
TraesCS4D01G327800.1	Wheat	cytosol	28.92	32.29
TraesCS1D01G207400.1	Wheat	cytosol	27.31	26.88
TraesCS4D01G327700.1	Wheat	cytosol, nucleus, peroxisome	28.92	22.29
TraesCS3D01G055700.1	Wheat	cytosol	26.91	8.84
TraesCS5D01G343100.1	Wheat	cytosol	26.51	1.54
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:GST_C	InterPro:GST_Phi_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF17	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS1D01G094900	EnsemblPlants:TraesCS1D01G094900.1	TIGR:cd03053	TIGR:cd03187
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:80539771..80541755

Molecular Weight (calculated)

27957.7 Da

IEP (calculated)

6.036

GRAVY (calculated)

-0.083

Length

249 amino acids

Sequence
(BLAST)

001: MISYVCLKLV CLHHDNSTEF LLCCRAMAPA VKVYGWAMSP FVARALLCLE EAGVDYELVP MSREAGDHRQ PDFLARNPFG QVPVLEDGDL TIFESRAVAR
101: HVLRNHKPEL LGSGSPESAA MVDVWLEVEA HQHQTPAGTI VMQCILTPFL GCKRDQAAID ENAAKLTKLF DVYEARLSAS RYLAGDSLSL ADLSHFPLMR
201: YFMDTEYASL VEERPHVKAW WEELKVRPAA KRVTEFMPPN FGFGKTAEK

Best Arabidopsis Sequence Match ( AT1G02930.1 )
(BLAST)

001: MAGIKVFGHP ASTATRRVLI ALHEKNVDFE FVHVELKDGE HKKEPFILRN PFGKVPAFED GDFKIFESRA ITQYIAHEFS DKGNNLLSTG KDMAIIAMGI
101: EIESHEFDPV GSKLVWEQVL KPLYGMTTDK TVVEEEEAKL AKVLDVYEHR LGESKYLASD HFTLVDLHTI PVIQYLLGTP TKKLFDERPH VSAWVADITS
201: RPSAQKVL

Arabidopsis Description

GSTF6Glutathione S-transferase F6 [Source:UniProtKB/Swiss-Prot;Acc:P42760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.