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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, secretory
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
MultiLoc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES17708 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 80.37 76.11
TraesCS1D01G094700.1 Wheat endoplasmic reticulum 73.36 70.72
TraesCS1B01G113600.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 73.83 70.54
TraesCS1A01G102700.1 Wheat endoplasmic reticulum 73.36 70.4
HORVU1Hr1G021140.1 Barley endoplasmic reticulum 73.36 70.4
TraesCS1B01G113500.1 Wheat endoplasmic reticulum 72.9 70.27
TraesCS1D01G094800.1 Wheat endoplasmic reticulum, extracellular 73.36 70.09
TraesCS7B01G084400.1 Wheat endoplasmic reticulum 71.03 67.86
TraesCS1D01G095400.1 Wheat cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 71.03 67.86
TraesCS1B01G113700.1 Wheat endoplasmic reticulum 70.56 67.71
TraesCS1A01G102800.1 Wheat cytosol 69.63 66.52
HORVU7Hr1G036850.2 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 69.63 66.22
TraesCS1B01G114400.1 Wheat cytosol 57.48 64.74
HORVU1Hr1G021180.1 Barley cytosol 71.03 64.68
TraesCS1D01G094900.1 Wheat cytosol 71.03 61.04
EES02961 Sorghum cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 61.68 59.46
HORVU1Hr1G021150.2 Barley cytosol, plastid 71.5 57.95
GSMUA_Achr2P02330_001 Banana cytosol 56.07 55.56
EES03661 Sorghum cytosol 53.27 53.27
EES05217 Sorghum cytosol 52.34 50.0
EES17713 Sorghum endoplasmic reticulum, extracellular 52.8 49.34
EES15857 Sorghum cytosol 50.0 48.64
VIT_07s0104g01800.t01 Wine grape cytosol 49.07 48.39
EES12862 Sorghum cytosol 50.93 47.6
KRH31902 Soybean cytosol 48.13 47.25
VIT_07s0104g01810.t01 Wine grape cytosol 47.2 46.54
KRH71551 Soybean cytosol 47.66 46.36
EES15858 Sorghum cytosol 47.66 46.15
EES15859 Sorghum cytosol 47.2 45.5
Bra014394.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 44.86 43.84
CDX89147 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 44.86 43.84
CDX93963 Canola cytosol 44.39 43.38
AT3G62760.1 Thale cress cytosol 43.46 42.47
KXG37119 Sorghum cytosol 51.4 42.31
KXG34068 Sorghum endoplasmic reticulum 39.25 38.36
EER92907 Sorghum cytosol, plastid 36.92 35.27
EER92908 Sorghum cytosol 34.11 32.3
OQU93289 Sorghum cytosol 30.84 29.33
EER92000 Sorghum cytosol 31.31 27.8
KXG38989 Sorghum cytosol 29.91 21.77
EER92911 Sorghum cytosol 29.44 20.93
EES13729 Sorghum cytosol 30.84 6.54
OQU89855 Sorghum cytosol 31.78 1.98
CDY18134 Canola nucleus 0.0 0.0
Protein Annotations
KEGG:00480+2.5.1.18KEGG:00980+2.5.1.18KEGG:00982+2.5.1.18KEGG:00983+2.5.1.18Gene3D:1.20.1050.10MapMan:18.8.1.5
Gene3D:3.40.30.10UniProt:A0A1B6P6M7ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:GST_CInterPro:GST_Phi_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_NInterPro:IPR004045
InterPro:IPR010987EnsemblPlants:KXG21305ProteinID:KXG21305ProteinID:KXG21305.1PFAM:PF00043PFAM:PF02798
PFscan:PS50404PFscan:PS50405PANTHER:PTHR43900PANTHER:PTHR43900:SF17MetaCyc:PWY-4061MetaCyc:PWY-6842
MetaCyc:PWY-7112MetaCyc:PWY-7533EnsemblPlantsGene:SORBI_3009G043700SUPFAM:SSF47616SUPFAM:SSF52833InterPro:Thioredoxin-like_sf
UniParc:UPI00081AD402:::::
Description
hypothetical protein
Coordinates
chr9:+:4145185..4146327
Molecular Weight (calculated)
23727.7 Da
IEP (calculated)
5.841
GRAVY (calculated)
0.033
Length
214 amino acids
Sequence
(BLAST)
001: MAVKVYGWAI SPFVSRVLLC LEEAGVDYEL VPMSRATADH RHPDHLARNV PVLEDGQLTL FESRAIARHV LRKYKPELLG ASSLEQSAMV DMWVEVEAHQ
101: LQPPAGAIAV ECIVAPVLQG RERNQAAIDE NVEKLKKVLE VYEARLSQSK YLAGDVLSLA DLSHFTIMHY FMATEYATLV KALPHVDAWW EGLAARPAAK
201: KVAEFMPLGS GVPE
Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)
001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN
Arabidopsis Description
GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.