CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92908	Sorghum	cytosol	54.77	58.41
OQU93289	Sorghum	cytosol	53.94	57.78
GSMUA_Achr1P02270_001	Banana	cytosol	47.3	49.57
EER92907	Sorghum	cytosol, plastid	38.17	41.07
KXG34068	Sorghum	endoplasmic reticulum	30.71	33.79
KXG38989	Sorghum	cytosol	40.25	32.99
EES05217	Sorghum	cytosol	30.29	32.59
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.8	31.31
EER92911	Sorghum	cytosol	38.59	30.9
EES12862	Sorghum	cytosol	29.05	30.57
EES15857	Sorghum	cytosol	27.8	30.45
EES03661	Sorghum	cytosol	26.56	29.91
EES15858	Sorghum	cytosol	27.39	29.86
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	27.39	29.2
EES17713	Sorghum	endoplasmic reticulum, extracellular	27.39	28.82
EES15859	Sorghum	cytosol	26.14	28.38
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.14	28.38
KXG37119	Sorghum	cytosol	26.56	24.62
EES13729	Sorghum	cytosol	33.2	7.93
OQU89855	Sorghum	cytosol	34.02	2.39

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.5	Gene3D:3.40.30.10	UniProt:C5WTI8	EnsemblPlants:EER92000	ProteinID:EER92000
ProteinID:EER92000.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF13417	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF14	EnsemblPlantsGene:SORBI_3001G310200	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0001A825A4	RefSeq:XP_002465002.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:59681740..59683111

Molecular Weight (calculated)

26123.0 Da

IEP (calculated)

7.150

GRAVY (calculated)

-0.034

Length

241 amino acids

Sequence
(BLAST)

001: MASSAMLQVF GQPASTDVAR VMACLLERQL DFELVRTDTF KRGHKQLPEF VKMRDPSGQQ VTLTHGNITL GDSRDICRYV CTEFPRWCTR DLYGAGALER
101: ASIEQWLQAE AQSFDAPSSA LAAFHLAVGG APAPCVAVGD EKAAAAAESE RELLRVLDVY DGALGRSAYL AGDEFTLADL SHLPSAHYLA CSARGRALLA
201: SRGNVARWYA AISSRPAWRQ VVAVQARTAH YPVVAFHPSA V

Best Arabidopsis Sequence Match ( AT2G47730.1 )
(BLAST)

001: MGAIQARLPL FLSPPSIKHH TFLHSSSSNS NFKIRSNKSS SSSSSSIIMA SIKVHGVPMS TATMRVLATL YEKDLQFELI PVDMRAGAHK QEAHLALNPF
101: GQIPALEDGD LTLFESRAIT QYLAEEYSEK GEKLISQDCK KVKATTNVWL QVEGQQFDPN ASKLAFERVF KGMFGMTTDP AAVQELEGKL QKVLDVYEAR
201: LAKSEFLAGD SFTLADLHHL PAIHYLLGTD SKVLFDSRPK VSEWIKKISA RPAWAKVIDL QKQ

Arabidopsis Description

GSTF8Glutathione S-transferase F8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q96266]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.