CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
extracellular 3
golgi 3
plasma membrane 3
endoplasmic reticulum 3
vacuole 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES05217	Sorghum	cytosol	82.53	84.38
TraesCS1D01G081200.1	Wheat	cytosol	78.6	82.19
TraesCS1B01G097400.1	Wheat	cytosol	78.6	82.19
TraesCS1A01G078800.1	Wheat	golgi	78.6	82.19
Os01t0371200-01	Rice	plasma membrane	78.17	81.74
TraesCS1B01G097200.1	Wheat	cytosol	78.17	81.74
TraesCS1A01G078900.1	Wheat	cytosol	75.98	79.45
TraesCS2D01G579500.1	Wheat	cytosol	75.55	79.0
TraesCS2D01G503200.1	Wheat	cytosol	75.55	79.0
EES15857	Sorghum	cytosol	66.81	69.55
EES15858	Sorghum	cytosol	66.81	69.23
TraesCS6D01G016700.1	Wheat	cytosol	71.62	67.49
EES15859	Sorghum	cytosol	65.07	67.12
GSMUA_Achr2P02330_001	Banana	cytosol	60.26	63.89
EES03661	Sorghum	cytosol	58.08	62.15
HORVU1Hr1G017050.1	Barley	plastid	57.21	58.48
EES02961	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.84	54.5
KXG37119	Sorghum	cytosol	60.7	53.46
VIT_07s0104g01800.t01	Wine grape	cytosol	50.66	53.46
EES17713	Sorghum	endoplasmic reticulum, extracellular	52.84	52.84
VIT_07s0104g01810.t01	Wine grape	cytosol	49.78	52.53
KXG21305	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	47.6	50.93
Bra014394.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.03	50.23
CDX89147	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.03	50.23
EES17708	Sorghum	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	49.34	50.0
CDX93963	Canola	cytosol	47.6	49.77
KRH71551	Soybean	cytosol	46.72	48.64
AT3G62760.1	Thale cress	cytosol	46.29	48.4
KRH31902	Soybean	cytosol	45.85	48.17
Os01t0370900-00	Rice	mitochondrion	51.09	47.18
KXG34068	Sorghum	endoplasmic reticulum	43.67	45.66
EER92907	Sorghum	cytosol, plastid	36.24	37.05
EER92908	Sorghum	cytosol	35.37	35.84
OQU93289	Sorghum	cytosol	33.19	33.78
EER92000	Sorghum	cytosol	30.57	29.05
KXG38989	Sorghum	cytosol	31.88	24.83
EER92911	Sorghum	cytosol	30.13	22.92
EES13729	Sorghum	cytosol	27.51	6.24
OQU89855	Sorghum	cytosol	28.82	1.93
CDY18134	Canola	nucleus	0.0	0.0

Protein Annotations

KEGG:00480+2.5.1.18	KEGG:00980+2.5.1.18	KEGG:00982+2.5.1.18	KEGG:00983+2.5.1.18	Gene3D:1.20.1050.10	MapMan:18.8.1.5
Gene3D:3.40.30.10	EntrezGene:8066788	UniProt:C5YG26	EnsemblPlants:EES12862	ProteinID:EES12862	ProteinID:EES12862.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016740	InterPro:GST_C	InterPro:GST_Phi_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR43900	PANTHER:PTHR43900:SF1	MetaCyc:PWY-4061	MetaCyc:PWY-6842	MetaCyc:PWY-7112
MetaCyc:PWY-7533	EnsemblPlantsGene:SORBI_3006G216300	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A87626
RefSeq:XP_002448534.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:56420454..56422059

Molecular Weight (calculated)

25630.8 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.093

Length

229 amino acids

Sequence
(BLAST)

001: MAPVKVFGPA MSTNVARVLV CLEEVGAEYE VVNIDFQSKE HKSPEHLARN PFGQIPAFQD GDVVLFESRA ISKYILRKYK YSKSSASAAD LLREGDLKEA
101: AMVDMWTEVE AHQYNPALSP VVYECLIHPA MRGIPTDQRV VDESLEKLRK VLDVYEARLC KHAYLAGDFV SFADLNHFPY TFYFMATPHA SLFDSYPHVK
201: AWWERLLARP SVKKLGATMA AAAAAGVKA

Best Arabidopsis Sequence Match ( AT3G62760.1 )
(BLAST)

001: MAMKLYGDEM SACVARVLLC LHEKNTEFEL VPVNLFACHH KLPSFLSMNP FGKVPALQDD DLTLFESRAI TAYIAEKHRD KGTDLTRHED PKEAAIVKLW
101: SEVEAHHFNP AISAVIHQLI VVPLQGESPN AAIVEENLEN LGKILDVYEE RLGKTKYLAG DTYTLADLHH VPYTYYFMKT IHAGLINDRP NVKAWWEDLC
201: SRPAFLKVSP GLTVAPTTN

Arabidopsis Description

GSTF13Glutathione S-transferase F13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.